Merge branch 'master' of https://github.com/Art-n-MathS/DASOS

DASOS_win/ExerciseCommands.bat

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+:: go to directory
+cd C:\DASOS_userGuide\DASOS
+
+:: help 
+DASOS --help
+:: extract sample amplitudes for deciding noise level
+DASOS -las ..\SampleDATA\DATASET_1\LDR-FW-FW10_01-201009821.LAS -exportPulses 12 ..\LAS21pulsesSamples.csv
+
+DASOS -las ..\SampleDATA\DATASET_2\Australia_2.las -exportPulses 12 ..\Australia_2_pulsesSamples.csv
+
+:: export sample metric and visualise it in QGIS
+DASOS -las ..\SampleDATA\DATASET_2\Australia_2.las -nl 6 -vl 2 -map height ..\Australia_2_vl2_height
+
+DASOS -las ..\SampleDATA\DATASET_2\Australia_3.las -nl 6 -vl 2 -map height ..\Australia_3_vl2_height
+
+:: import:: extract sample amplitudes for deciding noise level
+DASOS -las ..\SampleDATA\DATASET_1\LDR-FW-FW10_01-201009821.LAS -exportPulses 12 ..\LAS21pulsesSamples.csv
+
+DASOS -las ..\SampleDATA\DATASET_2\Australia_2.las -exportPulses 12 ..\Australia_2_pulsesSamples.csv
+
+:: export sample metric and visualise it in QGIS
+ two files and export a volumetric file
+DASOS -las ..\SampleDATA\DATASET_2\Australia_3.las ..\SampleDATA\DATASET_2\Australia_2.las -nl 6 -vl 2 -iso 4 -userLimits 6199990 6199639 762405 761951 -exportVolume c ..\Australia2-3.vol
+
+:: import volume and export metrics
+DASOS -volume ..\Australia2-3.vol -map height ..\Australia2-3 -map all_fw ..\Australia2-3
+
+:: introducing dtm
+DASOS -las ..\SampleDATA\DATASET_2\Australia_3.las ..\SampleDATA\DATASET_2\Australia_2.las -dtm ..\SampleDATA\DATASET_2\Australia_2_dtm.bil -nl 6 -vl 2 -iso 4 -userLimits 6199990 6199639 762405 761951 -exportVolume c ..\Australia2-3_dtm.vol -map height ..\Australia2-3_vl2_dtm_height
+
+:: use the volume again to create something interesting
+DASOS -volume ..\Australia2-3_dtm.vol -map AVERAGE_HEIGHT_DIFFERENCE ..\Australia2-3_dtm_AVG_height_diff
+
+:: pulsewaves data
+DASOS -pw ..\SampleDATA\DATASET_2\Australia_1.pls -exportPulses 15 ..\PLS_amplitudeSamples.csv 
+
+DASOS -pw ..\SampleDATA\DATASET_2\Australia_1.pls -nl 5 -dtm ..\SampleDATA\DATASET_2\Australia_1_DTM_1m.bil 5 -vl 3 -map thickness ..\PLS_vl3_thickness -exportVolume ..\Australia_1_vl3_dtm.vol
+
+:: Exporting Polygon representation but there is a bug and a bunch of cone may be created instead (an exception was thrown last time)
+DASOS -las ..\SampleDATA\DATASET_1\LDR-FW-FW10_01-201009821.LAS -nl 20 -vl 1.7 -obj ..\LAS21.obj -exportVolume c ..\LAS21_vl1.7.vol
+
+:: Hyperspectral Imagery 
+:: Limitation: don't use ..\ because the output polygon won't be able to match the texture with the object. It is suggested to not include directory as well and then the file will be autotimatically saved into the same directory as the executable file of DASOS. 
+DASOS -volume ..\LAS21_vl1.7.vol -bil ..\SampleDATA\DATASET_1\e098211b_masked.bil -igm  ..\SampleDATA\DATASET_1\e098211b_osgn.igm -fodis ..\SampleDATA\DATASET_1\e098211b_FODIS.bil -rgb 240 78 23 -obj LAS21_coloured.obj
+
+:: Hyperspectral Metrics
+DASOS -volume ..\LAS21_vl1.7.vol -bil ..\SampleDATA\DATASET_1\e098211b_masked.bil -igm  ..\SampleDATA\DATASET_1\e098211b_osgn.igm -fodis ..\SampleDATA\DATASET_1\e098211b_FODIS.bil -map hyperspectral 140 ..\LAS21_band140 -map height ..\LAS21_height -map NDVI ..\LAS21_ndvi 
+
+:: All commands together
+
+
+
+:: Exporting 3D priors
+DASOS -vols ..\SampleDATA\DATASET_3  -icsv ..\SampleDATA\DATASET_3\testFieldplot.csv -eparameters processed -column isDead -class dead -ttype square 3 3 5 -ocsv templatesProcessedCuboid
+
+DASOS -vols ..\SampleDATA\DATASET_3  -icsv ..\SampleDATA\DATASET_3\testFieldplot.csv -eparameters raw -column isDead -class ALL -ttype cylinder 5 3 -ocsv templatesALLCylinder
+