Merge pull request #18 from jporobicg/master

update lightLim to include ice phyt
Atlantis-Ecosystem-Model · Dec 15, 2023 · d9790ae · d9790ae
2 parents 54024ab + e046bab
commit d9790ae
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/R/initGen.R b/R/initGen.R
@@ -120,7 +120,7 @@ generate.vars.init <- function(grp.file, cum.depths, df.atts, ice_model) {
 
     ## set up a flag for groups that need light adaptation
     light.adpn.grps <- c("DINOFLAG", "MICROPHTYBENTHOS", "SM_PHY",
-                         "MED_PHY", "LG_PHY")
+                         "MED_PHY", "LG_PHY","ICE_DIATOMS", "ICE_MIXOTROPHS")
     df.grp <- df.grp %>% mutate(needsLight = grouptype %in% light.adpn.grps)
 
     ## set up a flag for groups that need live in the ice