NGS Read Mapping

Bioinformatics Training Platform (BTP) Module: NGS Read Mapping with Bowtie2

• Topic
  • NGS Read Mapping with Bowtie2
• Target Audience
  • Biologists
  • Non-bioinformaticians
  • Little to no programming expereience
• Prerequisites
  • None
• Key Learning Outcomes
  • Perform the simple NGS data alignment task against one interested reference data
  • Interpret and manipulate the mapping output using SAMtools
  • Visualise the alignment via a standard genome browser, e.g. IGV browser
• Time Required
  • 2 hrs

License

The contents of this repository are released under the Creative Commons Attribution 3.0 Unported License. For a summary of what this means, please see: http://creativecommons.org/licenses/by/3.0/deed.en_GB