btp-workshop-ngs

Bioinformatics Training Platform (BTP) Workshop: Introduction to Next Generation Sequencing Hands-on Workshop

• Topics

  1. Introduction to command line
  2. NGS Quality Control
  3. NGS Read Mapping
  4. Intro to RNA-Seq
  5. de novo assembly using bacterial example
  6. de novo assembly using sukaryotic example
  7. Using the Australian NeCTAR Research Cloud

• Target Audience

  • Biologists
  • Non-bioinformaticians
  • Little to no programming expereience

• Prerequisites

  • None

• Time Required

  • 2.5 days

• Compute Requirements

  • Minimum: 2 CPUs, 8GB RAM, 30GB Storage
  • Recommended: 4 CPUs, 16GB RAM, 50GB Storage

License

The contents of this repository are released under the Creative Commons Attribution 3.0 Unported License. For a summary of what this means, please see: http://creativecommons.org/licenses/by/3.0/deed.en_GB