Dev #148

Job	Run time
Run pipeline with test data (23.04.0)	21m 28s
Test workflow parameters (--consensus_caller ivar)	19m 38s
Run pipeline with test data (latest-everything)	21m 4s
Test workflow parameters (--variant_caller bcftools --consensus_caller ivar)	19m 54s
Test workflow parameters (--skip_fastp --skip_pangolin)	21m 6s
Test workflow parameters (--skip_variants)	7m 10s
Test Nanopore workflow (--gff false)	20m 58s
Test Nanopore workflow (--input false)	21m 36s
Test workflow parameters (--skip_cutadapt --skip_snpeff)	19m 16s
Test workflow parameters (--skip_kraken2)	20m 53s
Test Nanopore workflow (--min_barcode_reads 10000)	1m 49s
Test Nanopore workflow (--min_guppyplex_reads 10000)	3m 42s
Test workflow parameters (--skip_assembly)	16m 11s
Test Nanopore workflow (--artic_minion_caller medaka --sequencing_summary false --fast5_dir false)	28m 28s
Test workflow parameters (--spades_mode corona)	20m 23s
Test Nanopore workflow (--artic_minion_caller medaka --sequencing_summary false --fast5_dir false...	26m 55s
Test workflow parameters (--spades_mode metaviral)	21m 28s
Test workflow parameters (--skip_plasmidid false --skip_asciigenome)	21m 47s
Test SISPA workflow (--gff false)	13m 1s
Test SISPA workflow (--genome 'NC_045512.2')	13m 37s
	6h 0m 24s

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