Reword warning

BU-ISCIII · Mar 22, 2023 · 61124b2 · 61124b2
1 parent a584b82
commit 61124b2
Showing 1 changed file with 7 additions and 4 deletions.
diff --git a/lib/NfcoreTemplate.groovy b/lib/NfcoreTemplate.groovy
@@ -37,10 +37,13 @@ class NfcoreTemplate {
     //
     public static void warnParamsProvidedInConfig(workflow, log) {
         if (workflow.configFiles.size() > 1) {
-            log.warn "[$workflow.manifest.name] Multiple config files detected!\n" +
-                    "Parameters passed via custom config files including the '-c' Nextflow option will be ignored.\n" +
-                    "Please provide pipeline parameters via the '-params-file' Nextflow option instead.\n" +
-                    "Docs: https://nf-co.re/usage/configuration?q=params#custom-configuration-files\n"
+            log.warn "=============================================================================\n" +
+                "  Multiple config files detected!\n" +
+                "  Please provide pipeline parameters via the CLI or Nextflow '-params-file' option.\n" +
+                "  Custom config files including those provided by the '-c' Nextflow option can be\n" +
+                "  used to provide any configuration except for parameters.\n\n" +
+                "  Docs: https://nf-co.re/usage/configuration#custom-configuration-files\n" +
+                "==================================================================================="
         }
     }