Updates dependencies and code (#343)

- Updates dependencies to latest versions (libsonata to 1.11.0, MVDTool to 2.4.4, MorphIO to 3.3.3, HighFive to 2.3.1) - Updates HighFive converters of vectors of glm::vec types to latest API - Updates compartmentReportHDF5Legacy (old .h5) reader to use the correct types when reading strings from disk - Removes morphologyConverter
BlueBrain · Mar 11, 2022 · 5c19993 · 5c19993
1 parent 6195d83
commit 5c19993
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Showing 8 changed files with 63 additions and 411 deletions.
diff --git a/apps/CMakeLists.txt b/apps/CMakeLists.txt
@@ -20,16 +20,6 @@ install(TARGETS spikeConverter
     RUNTIME DESTINATION bin
 )
 
-add_executable(morphologyConverter morphologyConverter.cpp)
-target_link_libraries(morphologyConverter PRIVATE Brion)
-target_link_libraries(morphologyConverter PRIVATE HighFive)
-target_link_libraries(morphologyConverter PRIVATE ${Boost_PROGRAM_OPTIONS_LIBRARY})
-
-install(TARGETS morphologyConverter
-    EXPORT morphologyConverter-targets
-    RUNTIME DESTINATION bin
-)
-
 add_executable(compartmentConverter compartmentConverter.cpp)
 target_link_libraries(compartmentConverter PRIVATE Brion)
 target_link_libraries(compartmentConverter PRIVATE ${Boost_SYSTEM_LIBRARIES})

diff --git a/apps/morphologyConverter.cpp b/apps/morphologyConverter.cpp
diff --git a/brion/CMakeLists.txt b/brion/CMakeLists.txt
@@ -52,7 +52,6 @@ set(BRION_HEADERS
   detail/mesh.h
   detail/meshBinary.h
   detail/meshHDF5.h
-  detail/morphologyHDF5.h
   detail/skipWhiteSpace.h
   detail/utils.h
   detail/utilsHDF5.h

diff --git a/brion/detail/morphologyHDF5.h b/brion/detail/morphologyHDF5.h