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Computational code for describing changes in umbilical cord blood transcriptome profiles associated with maternal psychopathology

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Gene expression in cord blood links genetic risk for neurodevelopmental disorders with maternal stress and adverse childhood outcomes

Michael S. Breen, Aliza P. Wingo, Nastassja Koen, Kirsten A. Donald, Mark Nicol, Heather J. Zar, Kerry J. Ressler, Joseph D. Buxbaum, Dan J. Stein

Data availability and code repository.

Written by: Michael S. Breen
Contact: [email protected]
PubMed:https://www.ncbi.nlm.nih.gov/pubmed/29791872
GEO: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114852

File descriptions:
ExprsMat_GitHub.txt = Quality controlled and normalized gene expression matrix covering 149 umbilical cord blood samples
Metadata.txt = Meta-data file for 149 umibilical cord blood samples
QC_and_DEcode.R = Computational R code for QC and differential expression
WGCNA_Analysis.R = Computational R code for WGCNA analysis

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Computational code for describing changes in umbilical cord blood transcriptome profiles associated with maternal psychopathology

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