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Quarto GHA Workflow Runner committed Oct 28, 2024
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2 changes: 1 addition & 1 deletion .nojekyll
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165 changes: 48 additions & 117 deletions exercises.html
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Expand Up @@ -154,15 +154,15 @@ <h1 class="title">Exercises</h1>
<h2 class="anchored" data-anchor-id="instructions">Instructions</h2>
<div class="cell">
<div class="cell-output-display">
<div class="accordion mb-5" data-require-bs-caller="accordion()" data-require-bs-version="5" id="bslib-accordion-8706">
<div class="accordion mb-5" data-require-bs-caller="accordion()" data-require-bs-version="5" id="bslib-accordion-5244">
<div class="accordion-item" data-value="Exercise 1: a palmer penguins, single stack.">
<div class="accordion-header">
<button class="accordion-button" type="button" data-bs-toggle="collapse" data-bs-target="#bslib-accordion-panel-9353" aria-controls="bslib-accordion-panel-9353" aria-expanded="true">
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<div class="accordion-icon"></div>
<div class="accordion-title">Exercise 1: a palmer penguins, single stack.</div>
</button>
</div>
<div id="bslib-accordion-panel-9353" class="accordion-collapse collapse show">
<div id="bslib-accordion-panel-6509" class="accordion-collapse collapse show">
<div class="accordion-body">
<ol>
<li>
Expand Down Expand Up @@ -224,12 +224,12 @@ <h2 class="anchored" data-anchor-id="instructions">Instructions</h2>
</div>
<div class="accordion-item" data-value="Exercise 2: distribution of age, single stack.">
<div class="accordion-header">
<button class="accordion-button collapsed" type="button" data-bs-toggle="collapse" data-bs-target="#bslib-accordion-panel-6998" aria-expanded="false" aria-controls="bslib-accordion-panel-6998">
<button class="accordion-button collapsed" type="button" data-bs-toggle="collapse" data-bs-target="#bslib-accordion-panel-2639" aria-expanded="false" aria-controls="bslib-accordion-panel-2639">
<div class="accordion-icon"></div>
<div class="accordion-title">Exercise 2: distribution of age, single stack.</div>
</button>
</div>
<div id="bslib-accordion-panel-6998" class="accordion-collapse collapse">
<div id="bslib-accordion-panel-2639" class="accordion-collapse collapse">
<div class="accordion-body">
<ol>
<li>
Expand Down Expand Up @@ -300,12 +300,12 @@ <h2 class="anchored" data-anchor-id="instructions">Instructions</h2>
</div>
<div class="accordion-item" data-value="Exercise 3: a palmer penguins workspace.">
<div class="accordion-header">
<button class="accordion-button collapsed" type="button" data-bs-toggle="collapse" data-bs-target="#bslib-accordion-panel-1252" aria-expanded="false" aria-controls="bslib-accordion-panel-1252">
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<div class="accordion-icon"></div>
<div class="accordion-title">Exercise 3: a palmer penguins workspace.</div>
</button>
</div>
<div id="bslib-accordion-panel-1252" class="accordion-collapse collapse">
<div id="bslib-accordion-panel-3353" class="accordion-collapse collapse">
<div class="accordion-body">
<ol>
<li>
Expand Down Expand Up @@ -366,148 +366,81 @@ <h2 class="anchored" data-anchor-id="instructions">Instructions</h2>
</div>
</div>
</div>
<div class="accordion-item" data-value="Exercise 4: 'Hemoglobin by Visit plot' workspace.">
<div class="accordion-item" data-value="Exercise 4: joining data.">
<div class="accordion-header">
<button class="accordion-button collapsed" type="button" data-bs-toggle="collapse" data-bs-target="#bslib-accordion-panel-5688" aria-expanded="false" aria-controls="bslib-accordion-panel-5688">
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<div class="accordion-icon"></div>
<div class="accordion-title">Exercise 4: 'Hemoglobin by Visit plot' workspace.</div>
<div class="accordion-title">Exercise 4: joining data.</div>
</button>
</div>
<div id="bslib-accordion-panel-5688" class="accordion-collapse collapse">
<div id="bslib-accordion-panel-8168" class="accordion-collapse collapse">
<div class="accordion-body">
<ol>
<li>
<p>
Click on
<strong>Add stack</strong>
then add it a
<strong>customdata_block</strong>
with
<var>lab</var>
as data. Change the title to 'Lab data'.
</p>
</li>
<li>
<ul>
<li>
<p>
Click on
<strong>Add stack</strong>
, then add a
<code>customdata_block</code>
with
<var>demo</var>
as data.
</p>
</li>
<li>
<p>
Add a
<strong>join_block</strong>
with
<code>y = 'lab_data'</code>
<code>type = 'inner</code>
<code>by = c('STUDYID', 'USUBJID')</code>
.
</p>
</li>
<li>
<p>
Add a
<strong>filter_block</strong>
with
<code>colums = 'LBTEST'</code>
<code>values = 'Hemoglobin</code>
.
</p>
</li>
<li>
<p>
Add an
<code>arrange_block</code>
width
<var>VISITNUM</var>
as column.
</p>
</li>
<li>
<p>
Add a
<code>mutate_block</code>
with the following expression:
<code>VISIT = factor(VISIT, levels = unique(VISIT), ordered = TRUE)</code>
From the new stack: click on
<strong>+</strong>
to add a new
<code>customdata_block</code>
with
<var>lab</var>
as selected data.
</p>
</li>
<li>Rename the stack to 'Hemoglobin data'</li>
</ul>
</li>
<li>
<ul>
<li>
<p>
Click on
<strong>Add stack</strong>
then add a
<code>result_block</code>
selecting the 'hemoglobin_data' stack.
.
</p>
</li>
<li>
<p>
Add a
<code>group_by_block</code>
with
<var>VISIT</var>
Add a new
<code>join_block</code>
selecting
<var>lab_data</var>
as
<strong>Stack</strong>
and
<var>ACTARM</var>
as columns
</p>
</li>
<li>
<p>
Add a
<code>summarize_block</code>
with
<var>mean</var>
<var>inner</var>
as
<strong>type</strong>
and
<var>se</var>
as selected functions and
<var>LBSTRESN</var>
as column for each function.
</p>
</li>
<li>
<p>
Add an
<code>ungroup_block</code>
.
</p>
</li>
<li>
<p>
Add a
<code>mutate_block</code>
with
<code>ymin = 'MEAN - SE'</code>
and then click
<strong>+</strong>
to add another expression, that is,
<code>ymax = 'MEAN + SE'</code>
.
<var>c('STUDYID', 'USUBJID')</var>
as
<strong>by</strong>
. Click on run.
</p>
</li>
<li>Rename the stack to 'Summary data'</li>
</ul>
</li>
<li>
<ul>
</ol>
</div>
</div>
</div>
<div class="accordion-item" data-value="Exercise 5: 'Hemoglobin by Visit plot' workspace.">
<div class="accordion-header">
<button class="accordion-button collapsed" type="button" data-bs-toggle="collapse" data-bs-target="#bslib-accordion-panel-6536" aria-expanded="false" aria-controls="bslib-accordion-panel-6536">
<div class="accordion-icon"></div>
<div class="accordion-title">Exercise 5: 'Hemoglobin by Visit plot' workspace.</div>
</button>
</div>
<div id="bslib-accordion-panel-6536" class="accordion-collapse collapse">
<div class="accordion-body">
<ol>
<li>
<p>
Click on
<strong>Add stack</strong>
then add a
<code>result_block</code>
selecting the 'summary_data' stack.
selecting the 'hb_data' stack.
</p>
</li>
<li>
Expand All @@ -517,7 +450,7 @@ <h2 class="anchored" data-anchor-id="instructions">Instructions</h2>
with
<code>x = 'VISIT</code>
and
<code>x = 'MEAN</code>
<code>y = 'Mean</code>
as aesthetics.
</p>
</li>
Expand Down Expand Up @@ -574,8 +507,6 @@ <h2 class="anchored" data-anchor-id="instructions">Instructions</h2>
.
</p>
</li>
</ul>
</li>
</ol>
</div>
</div>
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