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Issues list

review docs website, update as needed for v1.0 ccbrpipeliner/7 documentation Improvements or additions to documentation
#110 opened Jul 26, 2024 by kelly-sovacool
@kopardev
refactor CLI in python
#109 opened May 22, 2024 by kelly-sovacool 2024-08
set singularity cachedir to workdir enhancement New feature or request
#108 opened May 22, 2024 by kelly-sovacool 2024-08
@kelly-sovacool
Add CHARLIE to ccbrpipeliner ccbrpipeliner/7 charlie
#107 opened May 14, 2024 by kopardev 2023-07
@kopardev @kelly-sovacool
add option for different tmp-dir
#106 opened May 14, 2024 by kelly-sovacool 2024-08
1
@kelly-sovacool
1
DCC has been deprecated in favor of circtools detect
#105 opened May 3, 2024 by kelly-sovacool
novoalign is not F/LOSS bug Something isn't working HighPriority
#104 opened Apr 4, 2024 by kelly-sovacool
linter actions are failing bug Something isn't working
#103 opened Mar 28, 2024 by kelly-sovacool
python 3.7 module is deprecated bug Something isn't working
#101 opened Mar 28, 2024 by kelly-sovacool
convert to platform-agnostic pipeline HighPriority
#99 opened Feb 6, 2024 by kelly-sovacool 2024-05
1
@kelly-sovacool
15
update citation file with Zenodo DOI after we cut the next release
#98 opened Jan 30, 2024 by kelly-sovacool
@kelly-sovacool
Create CHANGELOG
#94 opened Jan 9, 2024 by kelly-sovacool
@kelly-sovacool
test
#92 opened Sep 8, 2023 by kopardev
@kopardev
Trimming dockerization enhancement New feature or request
#91 opened Aug 18, 2023 by kopardev
@kopardev
SINGULARITY_CACHEDIR not working as expected. bug Something isn't working charlie
#90 opened Aug 18, 2023 by kopardev 2024-03
@kopardev
new plots charlie enhancement New feature or request
#69 opened Apr 11, 2023 by kopardev
@kopardev
Cross reference datasets with those from already published papers
#31 opened Sep 21, 2022 by kopardev
Update documentation/description
#30 opened Sep 21, 2022 by kopardev
2
Interface with Viral databases enhancement New feature or request LowPriority
#28 opened Sep 21, 2022 by kopardev 2024-04
@kopardev
2
Try CIRIQuant enhancement New feature or request LowPriority
#11 opened Jan 12, 2021 by kopardev
@kopardev
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