added sra modules

CDCgov · Jun 25, 2024 · 8df4aa6 · 8df4aa6
1 parent b58117e
commit 8df4aa6
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Showing 26 changed files with 797 additions and 3 deletions.
diff --git a/modules/nf-core/modules/sra_fastq_ftp/main.nf b/modules/nf-core/modules/sra_fastq_ftp/main.nf
diff --git a/modules/nf-core/modules/sra_fastq_ftp/nextflow.config b/modules/nf-core/modules/sra_fastq_ftp/nextflow.config
diff --git a/modules/nf-core/modules/sra_ids_to_runinfo/main.nf b/modules/nf-core/modules/sra_ids_to_runinfo/main.nf
diff --git a/modules/nf-core/modules/sra_ids_to_runinfo/nextflow.config b/modules/nf-core/modules/sra_ids_to_runinfo/nextflow.config
diff --git a/modules/nf-core/modules/sra_runinfo_to_ftp/main.nf b/modules/nf-core/modules/sra_runinfo_to_ftp/main.nf
diff --git a/modules/nf-core/modules/sra_runinfo_to_ftp/nextflow.config b/modules/nf-core/modules/sra_runinfo_to_ftp/nextflow.config
diff --git a/modules/nf-core/modules/sra_to_samplesheet/main.nf b/modules/nf-core/modules/sra_to_samplesheet/main.nf
diff --git a/modules/nf-core/modules/sra_to_samplesheet/nextflow.config b/modules/nf-core/modules/sra_to_samplesheet/nextflow.config
diff --git a/modules/nf-core/modules/sratools/fasterqdump/environment.yml b/modules/nf-core/modules/sratools/fasterqdump/environment.yml
diff --git a/modules/nf-core/modules/sratools/fasterqdump/main.nf b/modules/nf-core/modules/sratools/fasterqdump/main.nf
diff --git a/modules/nf-core/modules/sratools/fasterqdump/meta.yml b/modules/nf-core/modules/sratools/fasterqdump/meta.yml
diff --git a/modules/nf-core/modules/sratools/fasterqdump/nextflow.config b/modules/nf-core/modules/sratools/fasterqdump/nextflow.config