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Update tpv_rules_local.yml
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adds testing TPV destination for fastqc
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martindemko authored Nov 18, 2024
1 parent b572b21 commit d17f67a
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# prevent tpv lint complaints
global:
default_inherits: default

tools:
.*/fastqc/.*:
scheduling:
require:
- test

destinations:
tpv_pulsar_test:
inherits: tpv_pulsar
runner: pulsar_tpv_runner
params:
submit_native_specification: "-l select=1:ncpus={int(cores)}:mem={int(mem)}gb:scratch_local={int(scratch)}gb -l walltime={int(walltime)}:00:00 -N {{ pulsar.nfs_prefix }}_j{job.id}__{tool.id if '/' not in tool.id else tool.id.split('/')[-2]+'_v'+tool.id.split('/')[-1]}__{user.username if user and hasattr(user, 'username') else 'anonymous'}"
scheduling:
require:
- test

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