temp as of tuesday

windowsInstaller/newFemr/Dockerfile

@@ -62,4 +62,4 @@ RUN sbt clean compile
 EXPOSE 9000
 
 # run fEMR using env variables
-ENTRYPOINT url=$DB_URL usr=$DB_USER pass=$DB_PASS sbt ~run
+ENTRYPOINT url=$DB_URL usr=$DB_USER pass=$DB_PASS sbt ~run

windowsInstaller/newFemr/conf/application.conf

@@ -0,0 +1,92 @@
+include "matching.conf"
+#Default admin username and password
+default.admin.username="admin"
+default.admin.password="admin"
+
+#Default superuser username and password
+default.superuser.username="superuser"
+default.superuser.password="password"
+
+#Set to 1 to limit functionality to only the research module
+#Set to 0 (or not 1) for normal functionality
+settings.researchOnly=0
+
+#Session time out, in minutes
+sessionTimeout=30
+
+#Password hash strength
+bcrypt.workFactor=10
+
+play.http.secret.key="xSLvw;4MmQfa0uc2oB8OuIh[=?t;hJ4wN=SGK8Xfmo?WHgQ2h>s@<hU?291ZO;/o"
+play.il8n.langs="en"
+
+#Register MySQL database settings
+db.default.driver="com.mysql.jdbc.Driver"
+db.default.url="jdbc:mysql://localhost/femr_db?characterEncoding=UTF-8"
+db.default.username="sa"
+db.default.password="password"
+db.default.logStatements=false
+
+#Register paths for photos
+#if photos.useDbStorage = "true", then fEmr will store all photos
+#  within the database.  Otherwise store them as files.
+photos.useDbStorage="true"
+photos.path="./Upload/Pictures/Patients"
+photos.encounterPath="./Upload/Pictures/PatientEncounters"
+photos.defaultProfilePhoto="./public/img/defaultProfile.png"
+#Register path for CSV export
+csv.path="./Upload/CSV"
+
+
+#Register eBean classes
+ebean.default=["femr.data.models.*"]
+
+#Register Guice modules
+play.modules.enabled += "femr.util.dependencyinjection.modules.BusinessLayerModule"
+play.modules.enabled += "femr.util.dependencyinjection.modules.DataLayerModule"
+play.modules.enabled += "femr.util.dependencyinjection.modules.MapperModule"
+play.modules.enabled += "femr.util.dependencyinjection.modules.UtilitiesModule"
+play.modules.enabled += "femr.util.dependencyinjection.modules.SeederModule"
+
+# true will turn on a scheduler
+# false will turn it off
+# This scheduler will check for internet connectivity and inform and
+# endpoint defined by locationDataEndpoint
+# It will also try to build a reverse SSH connection to the server running fEMR
+internetconnection.enableInternetConnectivityFunctionality = false
+# Time to wait before the task times out
+internetconnection.timeoutInMiliseconds = 1000
+# How often the scheduled task will check for internet
+internetconnection.connectionCheckIntervalInSeconds = 5
+# Note, that trailing slash is important. Django can't redirect and retain post data
+internetconnection.locationDataEndpoint = "http://central.teamfemr.org/femrlocations/postlocation/"
+# How often the scheduled task will inform the endpoint that it is awake
+internetconnection.locationDataSendIntervalInSeconds = 60
+# Parameters for executing ssh
+internetconnection.sshUser = ""
+internetconnection.sshHost = ""
+# SSH key that is not password protected
+internetconnection.pathToSshKey = ""
+#internetconnection.pathToSshKnownHosts = "/home/<your user>/.ssh/known_hosts"
+# Remote port listening for an SSH connection
+internetconnection.remoteSshPort = 0
+# Remote port that will forward SSH traffic
+internetconnection.remoteSshPortForward = 0
+# Local port listening for an SSH conncetion
+internetconnection.localSshPort = 0
+internetconnection.sshTimeoutInMilliseconds = 100000
+
+#Register custom error handler
+play.http.errorHandler = "femr.util.ErrorHandler"
+
+#Location for HTTP Filters
+play.http.filters = "femr.util.filters.Filters"
+
+#Akka HTTP server timeout overrides
+play.server.http.idleTimeout = 60s
+play.server.akka.requestTimeout = 60s
+
+play.assets {
+  path = "/public"
+  urlPrefix = "/assets"
+}

windowsInstaller/newFemr/conf/application.docker.conf

@@ -0,0 +1,91 @@
+#Default admin username and password
+default.admin.username="admin"
+default.admin.password="admin"
+
+#Default superuser username and password
+default.superuser.username="superuser"
+default.superuser.password="password"
+
+#Set to 1 to limit functionality to only the research module
+#Set to 0 (or not 1) for normal functionality
+settings.researchOnly=0
+
+#Session time out, in minutes
+sessionTimeout=30
+
+#Password hash strength
+bcrypt.workFactor=10
+
+play.http.secret.key="xSLvw;4MmQfa0uc2oB8OuIh[=?t;hJ4wN=SGK8Xfmo?WHgQ2h>s@<hU?291ZO;/o"
+play.il8n.langs="en"
+
+#Register MySQL database settings
+db.default.driver="com.mysql.jdbc.Driver"
+db.default.url=${?url}
+db.default.username=${?usr}
+db.default.password=${?pass}
+db.default.logStatements=false
+
+#Register paths for photos
+#if photos.useDbStorage = "true", then fEmr will store all photos
+#  within the database.  Otherwise store them as files.
+photos.useDbStorage="true"
+photos.path="./Upload/Pictures/Patients"
+photos.encounterPath="./Upload/Pictures/PatientEncounters"
+photos.defaultProfilePhoto="./public/img/defaultProfile.png"
+#Register path for CSV export
+csv.path="./Upload/CSV"
+
+
+#Register eBean classes
+ebean.default=["femr.data.models.*"]
+
+#Register Guice modules
+play.modules.enabled += "femr.util.dependencyinjection.modules.BusinessLayerModule"
+play.modules.enabled += "femr.util.dependencyinjection.modules.DataLayerModule"
+play.modules.enabled += "femr.util.dependencyinjection.modules.MapperModule"
+play.modules.enabled += "femr.util.dependencyinjection.modules.UtilitiesModule"
+play.modules.enabled += "femr.util.dependencyinjection.modules.SeederModule"
+
+# true will turn on a scheduler
+# false will turn it off
+# This scheduler will check for internet connectivity and inform and
+# endpoint defined by locationDataEndpoint
+# It will also try to build a reverse SSH connection to the server running fEMR
+internetconnection.enableInternetConnectivityFunctionality = false
+# Time to wait before the task times out
+internetconnection.timeoutInMiliseconds = 1000
+# How often the scheduled task will check for internet
+internetconnection.connectionCheckIntervalInSeconds = 5
+# Note, that trailing slash is important. Django can't redirect and retain post data
+internetconnection.locationDataEndpoint = "http://central.teamfemr.org/femrlocations/postlocation/"
+# How often the scheduled task will inform the endpoint that it is awake
+internetconnection.locationDataSendIntervalInSeconds = 60
+# Parameters for executing ssh
+internetconnection.sshUser = ""
+internetconnection.sshHost = ""
+# SSH key that is not password protected
+internetconnection.pathToSshKey = ""
+#internetconnection.pathToSshKnownHosts = "/home/<your user>/.ssh/known_hosts"
+# Remote port listening for an SSH connection
+internetconnection.remoteSshPort = 0
+# Remote port that will forward SSH traffic
+internetconnection.remoteSshPortForward = 0
+# Local port listening for an SSH conncetion
+internetconnection.localSshPort = 0
+internetconnection.sshTimeoutInMilliseconds = 100000
+
+#Register custom error handler
+#play.http.errorHandler = "femr.util.ErrorHandler"
+
+#Location for HTTP Filters
+play.http.filters = "femr.util.filters.Filters"
+
+#Akka HTTP server timeout overrides
+play.server.http.idleTimeout = 60s
+play.server.akka.requestTimeout = 60s
+
+play.assets {
+  path = "/public"
+  urlPrefix = "/assets"
+}

windowsInstaller/newFemr/conf/evolutions/default/1.sql

@@ -0,0 +1,15 @@
+# --- !Ups
+
+CREATE  TABLE `users` (
+  `id` INT NOT NULL AUTO_INCREMENT ,
+  `first_name` VARCHAR(255) NOT NULL ,
+  `last_name` VARCHAR(255) NULL ,
+  `email` VARCHAR(255) NOT NULL ,
+  `password` VARCHAR(255) NOT NULL ,
+  PRIMARY KEY (`id`) ,
+  UNIQUE INDEX `id_UNIQUE` (`id` ASC) ,
+  UNIQUE INDEX `email_UNIQUE` (`email` ASC) );
+
+# --- !Downs
+
+DROP TABLE IF EXISTS users;

windowsInstaller/newFemr/conf/evolutions/default/10.sql

@@ -0,0 +1,84 @@
+# --- !Ups
+
+UPDATE `vitals`
+SET name="Height_Feet"
+WHERE name="Height"
+AND unit_of_measurement = "feet";
+
+UPDATE `vitals`
+SET name="Height_Inches"
+WHERE name="Height"
+      AND unit_of_measurement = "inches";
+
+UPDATE `vitals`
+SET name="Heart_Rate"
+WHERE name="Heart Rate";
+
+UPDATE `vitals`
+SET name="Respiratory_Rate"
+WHERE name="Respiratory Rate";
+
+UPDATE `vitals`
+SET name="Oxygen_Saturation"
+WHERE name="Oxygen Saturation";
+
+UPDATE `vitals`
+SET name="Blood_Pressure_Systolic"
+WHERE name="Blood Pressure"
+      AND unit_of_measurement = "systolic";
+
+UPDATE `vitals`
+SET name="Blood_Pressure_Diasolic"
+WHERE name="Blood Pressure"
+      AND unit_of_measurement = "diasolic";
+
+UPDATE `vitals`
+SET unit_of_measurement="mmHg"
+WHERE unit_of_measurement="diasolic";
+
+UPDATE `vitals`
+SET unit_of_measurement="mmHg"
+WHERE unit_of_measurement="systolic";
+
+# --- !Downs
+
+UPDATE `vitals`
+SET name="Height"
+WHERE name="Height Feet"
+      AND unit_of_measurement = "feet";
+
+UPDATE `vitals`
+SET name="Height"
+WHERE name="Height_Inches"
+      AND unit_of_measurement = "inches";
+
+UPDATE `vitals`
+SET name="Heart Rate"
+WHERE name="Heart_Rate";
+
+UPDATE `vitals`
+SET name="Respiratory Rate"
+WHERE name="Respiratory_Rate";
+
+UPDATE `vitals`
+SET name="Oxygen Saturation"
+WHERE name="Oxygen_Saturation";
+
+UPDATE `vitals`
+SET name="Blood Pressure"
+WHERE name="Blood_Pressure_Systolic"
+      AND unit_of_measurement = "systolic";
+
+UPDATE `vitals`
+SET name="Blood Pressure"
+WHERE name="Blood_Pressure_Diasolic"
+      AND unit_of_measurement = "diasolic";
+
+UPDATE `vitals`
+SET unit_of_measurement="diasolic"
+WHERE name="Blood_Pressure_Diasolic";
+
+UPDATE `vitals`
+SET unit_of_measurement="systolic"
+WHERE name="Blood_Pressure_Systolic";
+

windowsInstaller/newFemr/conf/evolutions/default/100.sql

@@ -0,0 +1,13 @@
+# --- !Ups
+
+ALTER TABLE `play_evolutions`
+CHANGE COLUMN `apply_script` `apply_script` MEDIUMTEXT NULL DEFAULT NULL ,
+CHANGE COLUMN `revert_script` `revert_script` MEDIUMTEXT NULL DEFAULT NULL ,
+CHANGE COLUMN `last_problem` `last_problem` MEDIUMTEXT NULL DEFAULT NULL ;
+
+# --- !Downs
+
+ALTER TABLE `play_evolutions`
+CHANGE COLUMN `apply_script` `apply_script` TEXT NULL DEFAULT NULL ,
+CHANGE COLUMN `revert_script` `revert_script` TEXT NULL DEFAULT NULL ,
+CHANGE COLUMN `last_problem` `last_problem` TEXT NULL DEFAULT NULL ;

windowsInstaller/newFemr/conf/evolutions/default/101.sql

@@ -0,0 +1,7 @@
+# --- !Ups
+
+ALTER TABLE `system_settings` ADD COLUMN description VARCHAR(250);
+
+# --- !Downs
+
+ALTER TABLE `system_settings` DROP COLUMN `description`;

windowsInstaller/newFemr/conf/evolutions/default/102.sql

@@ -0,0 +1,11 @@
+# --- !Ups
+
+UPDATE `tab_fields`
+SET name="procedure_counseling"
+WHERE name="treatment"
+
+# --- !Downs
+
+UPDATE `tab_fields`
+SET name="treatment"
+WHERE name="procedure_counseling"

windowsInstaller/newFemr/conf/evolutions/default/103.sql

@@ -0,0 +1,8 @@
+# --- !Ups
+
+ALTER TABLE `photos`
+ADD COLUMN `photo` LONGBLOB NULL AFTER `insertTS`;
+
+# --- !Downs
+
+ALTER TABLE `photos` DROP COLUMN `photo`;

windowsInstaller/newFemr/conf/evolutions/default/104.sql

@@ -0,0 +1,17 @@
+# --- !Ups
+
+ALTER TABLE `patient_encounter_tab_fields`
+ADD COLUMN `IsDeleted` DATETIME NULL AFTER `chief_complaint_id`,
+ADD COLUMN `DeletedByUserId` INTEGER NULL AFTER `IsDeleted`,
+ADD CONSTRAINT `fk_deleted_by_user_id_id`
+FOREIGN KEY (`DeletedByUserId`)
+REFERENCES `users` (`id`)
+  ON DELETE NO ACTION
+  ON UPDATE NO ACTION;
+
+# --- !Downs
+
+ALTER TABLE `patient_encounter_tab_fields`
+DROP COLUMN `IsDeleted`,
+DROP FOREIGN KEY `fk_deleted_by_user_id_id`,
+DROP COLUMN `DeletedByUserId`;

windowsInstaller/newFemr/conf/evolutions/default/105.sql

@@ -0,0 +1,11 @@
+# --- !Ups
+
+ALTER TABLE `medication_inventories`
+ADD COLUMN `timeAdded` DATETIME NULL,
+ADD COLUMN `createdBy` INT(11) NULL;
+
+# --- !Downs
+
+ALTER TABLE `medication_inventories`
+DROP COLUMN `timeAdded`,
+DROP COLUMN `createdBy`;

windowsInstaller/newFemr/conf/evolutions/default/106.sql

@@ -0,0 +1,13 @@
+# --- !Ups
+
+ALTER TABLE `medication_inventories`
+ADD CONSTRAINT `fk_created_by_user_id_user_id`
+FOREIGN KEY (`createdBy`)
+REFERENCES `users` (`id`)
+  ON DELETE NO ACTION
+  ON UPDATE NO ACTION;
+
+# --- !Downs
+
+ALTER TABLE `medication_inventories`
+DROP FOREIGN KEY `fk_created_by_user_id_user_id`;

windowsInstaller/newFemr/conf/evolutions/default/107.sql

@@ -0,0 +1,11 @@
+# --- !Ups
+
+CREATE  TABLE `feedback` (
+  `id` INT NOT NULL AUTO_INCREMENT ,
+  `date` DATE NOT NULL ,
+  `feedback` TEXT NOT NULL ,
+  PRIMARY KEY (`id`) );
+
+# --- !Downs
+
+DROP TABLE IF EXISTS feedback;