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1. HiCDB HiCDB Public

   detect and visualize contact domain boundaries (CDBs) or differential CDBs from Hi-C (matlab version)

   MATLAB 6 2

2. RHiCDB RHiCDB Public

   detect and visualize contact domain boundaries (CDBs) or differential CDBs from Hi-C (R version)

   R 8 1

3. mobike-cup mobike-cup Public

   Our code in Mobike Big Data Challenge 2017 (top 10: futurefreedom)

   Python 2 1

4. HiCpipe HiCpipe Public

   an efficient Hi-C data processing pipeline

   MATLAB 15 8

5. NGS-pipelines NGS-pipelines Public

   see wiki for pipeline and tips for ChIP-seq, RNA-seq and Hi-C data processing!

   2