Merge pull request #326 from CliMA/ck/env_updates

Environment updates

perf/Project.toml → .buildkite/Project.toml

@@ -1,49 +1,71 @@
 [deps]
+Aqua = "4c88cf16-eb10-579e-8560-4a9242c79595"
 ArgParse = "c7e460c6-2fb9-53a9-8c5b-16f535851c63"
 BenchmarkTools = "6e4b80f9-dd63-53aa-95a3-0cdb28fa8baf"
 CUDA = "052768ef-5323-5732-b1bb-66c8b64840ba"
 ClimaComms = "3a4d1b5c-c61d-41fd-a00a-5873ba7a1b0d"
 ClimaCore = "d414da3d-4745-48bb-8d80-42e94e092884"
+ClimaCorePlots = "cf7c7e5a-b407-4c48-9047-11a94a308626"
 ClimaTimeSteppers = "595c0a79-7f3d-439a-bc5a-b232dc3bde79"
-Colors = "5ae59095-9a9b-59fe-a467-6f913c188581"
 DataStructures = "864edb3b-99cc-5e75-8d2d-829cb0a9cfe8"
 DiffEqBase = "2b5f629d-d688-5b77-993f-72d75c75574e"
 DiffEqCallbacks = "459566f4-90b8-5000-8ac3-15dfb0a30def"
+Distributions = "31c24e10-a181-5473-b8eb-7969acd0382f"
+FileIO = "5789e2e9-d7fb-5bc7-8068-2c6fae9b9549"
 JET = "c3a54625-cd67-489e-a8e7-0a5a0ff4e31b"
+JLD2 = "033835bb-8acc-5ee8-8aae-3f567f8a3819"
 JSON = "682c06a0-de6a-54ab-a142-c8b1cf79cde6"
 KernelAbstractions = "63c18a36-062a-441e-b654-da1e3ab1ce7c"
 Krylov = "ba0b0d4f-ebba-5204-a429-3ac8c609bfb7"
+LaTeXStrings = "b964fa9f-0449-5b57-a5c2-d3ea65f4040f"
 LinearAlgebra = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e"
 LinearOperators = "5c8ed15e-5a4c-59e4-a42b-c7e8811fb125"
-NVTX = "5da4648a-3479-48b8-97b9-01cb529c0a1f"
+MPI = "da04e1cc-30fd-572f-bb4f-1f8673147195"
+ODEConvergenceTester = "42a5c2e1-f365-4540-8ca5-3684de3ecd95"
 OrderedCollections = "bac558e1-5e72-5ebc-8fee-abe8a469f55d"
 PProf = "e4faabce-9ead-11e9-39d9-4379958e3056"
+Plots = "91a5bcdd-55d7-5caf-9e0b-520d859cae80"
 PrettyTables = "08abe8d2-0d0c-5749-adfa-8a2ac140af0d"
+Printf = "de0858da-6303-5e67-8744-51eddeeeb8d7"
 Profile = "9abbd945-dff8-562f-b5e8-e1ebf5ef1b79"
 ProfileCanvas = "efd6af41-a80b-495e-886c-e51b0c7d77a3"
 Random = "9a3f8284-a2c9-5f02-9a11-845980a1fd5c"
+SafeTestsets = "1bc83da4-3b8d-516f-aca4-4fe02f6d838f"
 SciMLBase = "0bca4576-84f4-4d90-8ffe-ffa030f20462"
 StaticArrays = "90137ffa-7385-5640-81b9-e52037218182"
 StatsBase = "2913bbd2-ae8a-5f71-8c99-4fb6c76f3a91"
 Test = "8dfed614-e22c-5e08-85e1-65c5234f0b40"
-URIs = "5c2747f8-b7ea-4ff2-ba2e-563bfd36b1d4"
 
 [compat]
+Aqua = "0.8"
 ArgParse = "1"
 BenchmarkTools = "1"
-ClimaCore = "0.10, 0.11, 0.12, 0.13, 0.14"
+CUDA = "5"
+ClimaComms = "0.6"
+ClimaCore = "0.14"
+ClimaCorePlots = "0.2"
 ClimaTimeSteppers = "0.7"
 DataStructures = "0.18"
 DiffEqBase = "6"
-DiffEqCallbacks = "2, 3"
-JET = "0.7, 0.8"
+DiffEqCallbacks = "4"
+Distributions = "0.25"
+FileIO = "1"
+JET = "0.8, 0.9"
+JLD2 = "0.5"
 JSON = "0.21"
-KernelAbstractions = "0.7, 0.8, 0.9"
-Krylov = "0.8, 0.9"
+KernelAbstractions = "0.9"
+Krylov = "0.9"
+LaTeXStrings = "1"
 LinearOperators = "2"
-PProf = "2, 3"
+MPI = "0.20"
+ODEConvergenceTester = "0.2"
+OrderedCollections = "1"
+PProf = "3"
+Plots = "1"
+PrettyTables = "2"
 ProfileCanvas = "0.1"
-SciMLBase = "1, 2"
+SafeTestsets = "0.1"
+SciMLBase = "2"
 StaticArrays = "1"
-URIs = "1"
+StatsBase = "0.34"
 julia = "1.8"

.dev/Manifest.toml

@@ -1,16 +1,9 @@
 # This file is machine-generated - editing it directly is not advised
 
-julia_version = "1.10.4"
+julia_version = "1.10.6"
 manifest_format = "2.0"
 project_hash = "b280bcf3b481823c97fa1a62c1b5e65114b8fa18"
 
-[[deps.ArgTools]]
-uuid = "0dad84c5-d112-42e6-8d28-ef12dabb789f"
-version = "1.1.1"
-
-[[deps.Artifacts]]
-uuid = "56f22d72-fd6d-98f1-02f0-08ddc0907c33"
-
 [[deps.Base64]]
 uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f"
 
@@ -21,16 +14,16 @@ uuid = "00ebfdb7-1f24-5e51-bd34-a7502290713f"
 version = "3.4.3"
 
 [[deps.CommonMark]]
-deps = ["Crayons", "JSON", "PrecompileTools", "URIs"]
-git-tree-sha1 = "532c4185d3c9037c0237546d817858b23cf9e071"
+deps = ["Crayons", "PrecompileTools"]
+git-tree-sha1 = "3faae67b8899797592335832fccf4b3c80bb04fa"
 uuid = "a80b9123-70ca-4bc0-993e-6e3bcb318db6"
-version = "0.8.12"
+version = "0.8.15"
 
 [[deps.Compat]]
 deps = ["TOML", "UUIDs"]
-git-tree-sha1 = "b1c55339b7c6c350ee89f2c1604299660525b248"
+git-tree-sha1 = "8ae8d32e09f0dcf42a36b90d4e17f5dd2e4c4215"
 uuid = "34da2185-b29b-5c13-b0c7-acf172513d20"
-version = "4.15.0"
+version = "4.16.0"
 
     [deps.Compat.extensions]
     CompatLinearAlgebraExt = "LinearAlgebra"
@@ -54,14 +47,6 @@ version = "0.18.20"
 deps = ["Printf"]
 uuid = "ade2ca70-3891-5945-98fb-dc099432e06a"
 
-[[deps.Downloads]]
-deps = ["ArgTools", "FileWatching", "LibCURL", "NetworkOptions"]
-uuid = "f43a241f-c20a-4ad4-852c-f6b1247861c6"
-version = "1.6.0"
-
-[[deps.FileWatching]]
-uuid = "7b1f6079-737a-58dc-b8bc-7a2ca5c1b5ee"
-
 [[deps.Glob]]
 git-tree-sha1 = "97285bbd5230dd766e9ef6749b80fc617126d496"
 uuid = "c27321d9-0574-5035-807b-f59d2c89b15c"
@@ -71,84 +56,21 @@ version = "1.3.1"
 deps = ["Markdown"]
 uuid = "b77e0a4c-d291-57a0-90e8-8db25a27a240"
 
-[[deps.JSON]]
-deps = ["Dates", "Mmap", "Parsers", "Unicode"]
-git-tree-sha1 = "31e996f0a15c7b280ba9f76636b3ff9e2ae58c9a"
-uuid = "682c06a0-de6a-54ab-a142-c8b1cf79cde6"
-version = "0.21.4"
-
 [[deps.JuliaFormatter]]
-deps = ["CSTParser", "CommonMark", "DataStructures", "Glob", "Pkg", "PrecompileTools", "Tokenize"]
-git-tree-sha1 = "4b0b04fe63e02eed776181e14ebc1f48d787ceec"
+deps = ["CSTParser", "CommonMark", "DataStructures", "Glob", "PrecompileTools", "TOML", "Tokenize"]
+git-tree-sha1 = "59cf7ad64f1b0708a4fa4369879d33bad3239b56"
 uuid = "98e50ef6-434e-11e9-1051-2b60c6c9e899"
-version = "1.0.59"
-
-[[deps.LibCURL]]
-deps = ["LibCURL_jll", "MozillaCACerts_jll"]
-uuid = "b27032c2-a3e7-50c8-80cd-2d36dbcbfd21"
-version = "0.6.4"
-
-[[deps.LibCURL_jll]]
-deps = ["Artifacts", "LibSSH2_jll", "Libdl", "MbedTLS_jll", "Zlib_jll", "nghttp2_jll"]
-uuid = "deac9b47-8bc7-5906-a0fe-35ac56dc84c0"
-version = "8.4.0+0"
-
-[[deps.LibGit2]]
-deps = ["Base64", "LibGit2_jll", "NetworkOptions", "Printf", "SHA"]
-uuid = "76f85450-5226-5b5a-8eaa-529ad045b433"
-
-[[deps.LibGit2_jll]]
-deps = ["Artifacts", "LibSSH2_jll", "Libdl", "MbedTLS_jll"]
-uuid = "e37daf67-58a4-590a-8e99-b0245dd2ffc5"
-version = "1.6.4+0"
-
-[[deps.LibSSH2_jll]]
-deps = ["Artifacts", "Libdl", "MbedTLS_jll"]
-uuid = "29816b5a-b9ab-546f-933c-edad1886dfa8"
-version = "1.11.0+1"
-
-[[deps.Libdl]]
-uuid = "8f399da3-3557-5675-b5ff-fb832c97cbdb"
-
-[[deps.Logging]]
-uuid = "56ddb016-857b-54e1-b83d-db4d58db5568"
+version = "1.0.62"
 
 [[deps.Markdown]]
 deps = ["Base64"]
 uuid = "d6f4376e-aef5-505a-96c1-9c027394607a"
 
-[[deps.MbedTLS_jll]]
-deps = ["Artifacts", "Libdl"]
-uuid = "c8ffd9c3-330d-5841-b78e-0817d7145fa1"
-version = "2.28.2+1"
-
-[[deps.Mmap]]
-uuid = "a63ad114-7e13-5084-954f-fe012c677804"
-
-[[deps.MozillaCACerts_jll]]
-uuid = "14a3606d-f60d-562e-9121-12d972cd8159"
-version = "2023.1.10"
-
-[[deps.NetworkOptions]]
-uuid = "ca575930-c2e3-43a9-ace4-1e988b2c1908"
-version = "1.2.0"
-
 [[deps.OrderedCollections]]
 git-tree-sha1 = "dfdf5519f235516220579f949664f1bf44e741c5"
 uuid = "bac558e1-5e72-5ebc-8fee-abe8a469f55d"
 version = "1.6.3"
 
-[[deps.Parsers]]
-deps = ["Dates", "PrecompileTools", "UUIDs"]
-git-tree-sha1 = "8489905bcdbcfac64d1daa51ca07c0d8f0283821"
-uuid = "69de0a69-1ddd-5017-9359-2bf0b02dc9f0"
-version = "2.8.1"
-
-[[deps.Pkg]]
-deps = ["Artifacts", "Dates", "Downloads", "FileWatching", "LibGit2", "Libdl", "Logging", "Markdown", "Printf", "REPL", "Random", "SHA", "Serialization", "TOML", "Tar", "UUIDs", "p7zip_jll"]
-uuid = "44cfe95a-1eb2-52ea-b672-e2afdf69b78f"
-version = "1.10.0"
-
 [[deps.PrecompileTools]]
 deps = ["Preferences"]
 git-tree-sha1 = "5aa36f7049a63a1528fe8f7c3f2113413ffd4e1f"
@@ -165,10 +87,6 @@ version = "1.4.3"
 deps = ["Unicode"]
 uuid = "de0858da-6303-5e67-8744-51eddeeeb8d7"
 
-[[deps.REPL]]
-deps = ["InteractiveUtils", "Markdown", "Sockets", "Unicode"]
-uuid = "3fa0cd96-eef1-5676-8a61-b3b8758bbffb"
-
 [[deps.Random]]
 deps = ["SHA"]
 uuid = "9a3f8284-a2c9-5f02-9a11-845980a1fd5c"
@@ -177,50 +95,19 @@ uuid = "9a3f8284-a2c9-5f02-9a11-845980a1fd5c"
 uuid = "ea8e919c-243c-51af-8825-aaa63cd721ce"
 version = "0.7.0"
 
-[[deps.Serialization]]
-uuid = "9e88b42a-f829-5b0c-bbe9-9e923198166b"
-
-[[deps.Sockets]]
-uuid = "6462fe0b-24de-5631-8697-dd941f90decc"
-
 [[deps.TOML]]
 deps = ["Dates"]
 uuid = "fa267f1f-6049-4f14-aa54-33bafae1ed76"
 version = "1.0.3"
 
-[[deps.Tar]]
-deps = ["ArgTools", "SHA"]
-uuid = "a4e569a6-e804-4fa4-b0f3-eef7a1d5b13e"
-version = "1.10.0"
-
 [[deps.Tokenize]]
 git-tree-sha1 = "468b4685af4abe0e9fd4d7bf495a6554a6276e75"
 uuid = "0796e94c-ce3b-5d07-9a54-7f471281c624"
 version = "0.5.29"
 
-[[deps.URIs]]
-git-tree-sha1 = "67db6cc7b3821e19ebe75791a9dd19c9b1188f2b"
-uuid = "5c2747f8-b7ea-4ff2-ba2e-563bfd36b1d4"
-version = "1.5.1"
-
 [[deps.UUIDs]]
 deps = ["Random", "SHA"]
 uuid = "cf7118a7-6976-5b1a-9a39-7adc72f591a4"
 
 [[deps.Unicode]]
 uuid = "4ec0a83e-493e-50e2-b9ac-8f72acf5a8f5"
-
-[[deps.Zlib_jll]]
-deps = ["Libdl"]
-uuid = "83775a58-1f1d-513f-b197-d71354ab007a"
-version = "1.2.13+1"
-
-[[deps.nghttp2_jll]]
-deps = ["Artifacts", "Libdl"]
-uuid = "8e850ede-7688-5339-a07c-302acd2aaf8d"
-version = "1.52.0+1"
-
-[[deps.p7zip_jll]]
-deps = ["Artifacts", "Libdl"]
-uuid = "3f19e933-33d8-53b3-aaab-bd5110c3b7a0"
-version = "17.4.0+2"

Project.toml

@@ -30,7 +30,7 @@ ClimaTimeSteppersBenchmarkToolsExt = ["CUDA", "BenchmarkTools", "OrderedCollecti
 BenchmarkTools = "1"
 ClimaComms = "0.4, 0.5, 0.6"
 CUDA = "3, 4, 5"
-Colors = "0.12"
+Colors = "0.12, 0.13"
 DataStructures = "0.18"
 DiffEqBase = "6"
 KernelAbstractions = "0.7, 0.8, 0.9"