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1. Comparative-Annotation-Toolkit Comparative-Annotation-Toolkit Public

   Python 179 48

2. cactus cactus Public

   Official home of genome aligner based upon notion of Cactus graphs

   C 584 114

3. hal hal Public

   Hierarchical Alignment Format

   C++ 170 39

4. hal2vg hal2vg Public

   Convert HAL to VG

   C++ 22 2

5. taffy taffy Public

   This is a library C/Python/CLI for working with TAF (.taf,.taf.gz) and MAF (.maf) alignment files

   C 27 4

6. paffy paffy Public

   Small C/CLI library of pairwise alignment format (paf) format tools used by Cactus

   C 6 2