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@DCAN-Labs

Center for Developmental NeuroImaging (CDNI)

Our lab uses MRI to examine typical and atypical brain development. Our research is examining children with ASD as well as children and adults with ADHD.

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  1. BWAS BWAS Public

    Code to run Brain Wide Association Studies to derive PolyNeuro Risk Scores

    MATLAB 3 1

  2. biceps biceps Public

    Brain Imaging Connectivity Extraction Program Solution

    C

  3. BIBSnet BIBSnet Public

    This BIDS App provides the utility of creating a nnU-Net anatomical MRI segmentation and mask with a infant brain trained model. It can easily be included in other processing pipelines and for circ…

    Python 5 9

  4. CABINET CABINET Public

    CABINET is a utility that standardizes subsequent container execution. Emphasizing reproducibility, users can share JSONs to exactly replicate how containerized processes follow each other.

    Python 1 1

  5. abcd-hcp-pipeline abcd-hcp-pipeline Public

    bids application for processing functional MRI data, robust to scanner, acquisition and age variability.

    Python 52 20

  6. infant-abcd-bids-pipeline infant-abcd-bids-pipeline Public

    Human infant pipeline, based on abcd-hcp-pipeline, to process fMRI data.

    Python 8 4

Repositories

Showing 10 of 147 repositories
  • BIBSnet Public

    This BIDS App provides the utility of creating a nnU-Net anatomical MRI segmentation and mask with a infant brain trained model. It can easily be included in other processing pipelines and for circumventing JLF within Nibabies.

    DCAN-Labs/BIBSnet’s past year of commit activity
    Python 5 Apache-2.0 9 15 (1 issue needs help) 2 Updated Apr 10, 2025
  • loes-scoring-2 Public

    Code for automated Loes scoring.

    DCAN-Labs/loes-scoring-2’s past year of commit activity
    Jupyter Notebook 0 BSD-3-Clause 0 0 0 Updated Apr 9, 2025
  • hbcd-docs Public
    DCAN-Labs/hbcd-docs’s past year of commit activity
    1 Apache-2.0 3 1 0 Updated Apr 9, 2025
  • cdni-brain Public

    readthedocs for CDNI collaborators and members

    DCAN-Labs/cdni-brain’s past year of commit activity
    3 2 27 1 Updated Apr 8, 2025
  • Seg-Model-Creation-GUI Public

    A user interface for nNUnet model training

    DCAN-Labs/Seg-Model-Creation-GUI’s past year of commit activity
    Python 0 BSD-2-Clause 1 9 0 Updated Apr 8, 2025
  • nhp-abcd-bids-pipeline-synth Public Forked from DCAN-Labs/nhp-abcd-bids-pipeline

    Non-human primate (i.e., macaque) pipeline, based on abcd-hcp-pipeline, to process fMRI data. Incorporates Synth, a fieldmap-less distortion correction method for fMRI.

    DCAN-Labs/nhp-abcd-bids-pipeline-synth’s past year of commit activity
    Shell 0 BSD-3-Clause 5 0 0 Updated Apr 7, 2025
  • abcd-hcp-pipeline Public

    bids application for processing functional MRI data, robust to scanner, acquisition and age variability.

    DCAN-Labs/abcd-hcp-pipeline’s past year of commit activity
    Python 52 BSD-3-Clause 20 7 1 Updated Apr 7, 2025
  • internal-tools Public

    Tools written by DCAN Labs and used, in common, by the DCAN pipelines.

    DCAN-Labs/internal-tools’s past year of commit activity
    Dockerfile 1 BSD-3-Clause 0 0 0 Updated Apr 7, 2025
  • dcan_bold_processing Public

    functional connectivity preprocessing for resting state fMRI outputs of the dcan-fmri-pipelines

    DCAN-Labs/dcan_bold_processing’s past year of commit activity
    MATLAB 8 BSD-3-Clause 7 4 2 Updated Apr 7, 2025
  • HBCD-MADE Public

    HBCD branch of the MADE pipeline for EEG preprocessing

    DCAN-Labs/HBCD-MADE’s past year of commit activity
    MATLAB 3 GPL-3.0 3 0 0 Updated Apr 7, 2025
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