Releases
v0.0.3
Commits
d99eeb5 : run tests before publishing (Zhiyuan Chen)
89d52ae : fix rotary embedding in UtrLm and RnaFm (Zhiyuan Chen)
461ba05 : fix attention mask of RnaMsm (Zhiyuan Chen)
3fcb921 : fix head for utrlm and utrbert (Zhiyuan Chen)
2968292 : unify classification head (Zhiyuan Chen)
9f8b2a7 : rename Outputs of RnaMsm (Zhiyuan Chen)
bde2098 : add support of CrisprOffTarget tasks (Zhiyuan Chen)
83572c7 : set default value of head in code (Zhiyuan Chen)
3747c05 : improve token initialisation (Zhiyuan Chen)
9a41985 : support delete_existing in convert_checkpoint (Zhiyuan Chen)
8011687 : ensure pooler consistency (Zhiyuan Chen)
57039f7 : rename tokenizers -> tokenisers to avoid conflicts (Zhiyuan Chen)
e06fb22 : relax the input_ids in ContactPredictionHead (Zhiyuan Chen)
e2702d3 : use strameline vocab by default if nmers > 1 (Zhiyuan Chen)
4b1cd97 : add KMerTokenHead (Zhiyuan Chen)
3f9ec11 : add head for nucleotide-level tasks (Zhiyuan Chen)
91b0201 : add support of Nucleotide level tasks (Zhiyuan Chen)
449b56e : pytest now fails under 50 (Zhiyuan Chen)
cb98098 : set default transform_act to gelu (Zhiyuan Chen)
8e31573 : fix type hints (Zhiyuan Chen)
f74b91f : inspect if input_ids is NestedTensor (Zhiyuan Chen)
4ff51f9 : ignore convert_checkpoint.py in testing (Zhiyuan Chen)
c7cebc7 : unify typehints (Zhiyuan Chen)
6c53582 : unify criterion & build criterion into head (Zhiyuan Chen)
f8c825b : make multimolecule.module for shared modulet diff develop (Zhiyuan Chen)
5dfc33c : fix token & nucleodite head (Zhiyuan Chen)
b0c2b63 : use mcrmse for multi regression tasks (Zhiyuan Chen)
ce325f0 : allow additional kwargs in Nucleotide-level tasks (Zhiyuan Chen)
b61796b : add AutoModelForNucleotideClassification & AutoModelForCrisprOffTarget (Zhiyuan Chen)
b981919 : set model_max_length in covert_checkpoint (Zhiyuan Chen)
0c850cb : fix rnamsm output (Zhiyuan Chen)
c229a7d : add copyright header (Zhiyuan Chen)
c47578c : fix head config (Zhiyuan Chen)
6856ad8 : fix model_max_length of RnaFm Tokenizer (Zhiyuan Chen)
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