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Issues: DaehwanKimLab/hisat2
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(ERR): Expected hisat2 to be in same directory with hisat2-align-s and hisat2-align-l:
#446
opened Dec 11, 2024 by
mcastilloli2
updated Dec 26, 2024
Should I run hisat2 in a 2-pass mode for better mapping at novel junctions?
#443
opened Nov 9, 2024 by
weishwu
updated Nov 9, 2024
Any plans for supporting mac arm architecture?
#395
opened Oct 29, 2022 by
genzorp
updated Oct 18, 2024
Build index with hisat-3n, but one of the generated ht2 files is empty
#441
opened Sep 19, 2024 by
yaoyf03
updated Sep 19, 2024
Support Third-generation full-length RNA-seq?
#437
opened Jul 29, 2024 by
yjiang296
updated Jul 29, 2024
Any plans to support Apple Silicon architecture?
#419
opened Sep 30, 2023 by
itslittman
updated Jul 27, 2024
Question about calculation of base counts in hisat3Ntable
#433
opened Jun 21, 2024 by
shen-lanlan
updated Jun 21, 2024
--directional-mapping-reverse vs. --rna-strandness on HISAT3N
#432
opened Jun 17, 2024 by
paulinarosales
updated Jun 17, 2024
(ERR): "ref.genome" does not exist Exiting now ...
#431
opened Jun 8, 2024 by
Anees-caas
updated Jun 8, 2024
Mapping using different parameters --very-sensitive and default
#430
opened May 14, 2024 by
AllanOkwaro
updated May 14, 2024
[Future request] hisat-3n table option to report conversions summarized to genomic feature or reads counts
#428
opened Apr 4, 2024 by
paulinarosales
updated Apr 4, 2024
hisat2-build index for circRNA-seq
#426
opened Mar 27, 2024 by
fengweimin-maker
updated Mar 27, 2024
[Bug Report] hisat2-align exited with value 137, space complexity of hisat2
#423
opened Dec 11, 2023 by
bayegy
updated Dec 11, 2023
ERR): "fastq file.fastq" does not exist. Exiting now ...
#422
opened Nov 24, 2023 by
big-boo1
updated Nov 24, 2023
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