Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Mimic #16

Open
wants to merge 7 commits into
base: main
Choose a base branch
from
Open

Mimic #16

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
7 commits
Select commit Hold shift + click to select a range
d78c784
:sparkles: add 'name' field to mapping tasks
YemreGurses Sep 16, 2024
98bd075
:ok_hand: add fileFormat field to file system sources in jobs definit…
YemreGurses Sep 25, 2024
0ad2cca
✨ start mimic mappings
YemreGurses Aug 2, 2024
f6edf8d
:sparkles: start updating mimic mappings based on DT4H profiles
YemreGurses Aug 6, 2024
ae1909b
:safety_vest: fix mimic schemas
YemreGurses Aug 6, 2024
0d10873
:ok_hand: fix mimic schema names
YemreGurses Sep 12, 2024
5206054
:ok_hand: make mimic jobs up-to-date according to latest changes in t…
YemreGurses Sep 27, 2024
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
1 change: 1 addition & 0 deletions .gitignore
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -7,3 +7,4 @@ log-service.conf
**/target
projects.json
checkpoint
test-data/mimic-iv-data
10 changes: 10 additions & 0 deletions mapping-contexts/mimic/admission-type-concept-map.csv
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -0,0 +1,10 @@
source_code,target_class,target_class_display
AMBULATORY OBSERVATION,AMB,Ambulatory
DIRECT EMER.,EMER,Emergency
DIRECT OBSERVATION,OBSENC,Observation encounter
ELECTIVE,IMP,Inpatient encounter
EU OBSERVATION,EMER,Emergency
EW EMER.,EMER,Emergency
OBSERVATION ADMIT,IMP,Inpatient encounter
SURGICAL SAME DAY ADMISSION,SS,Short stay
URGENT,EMER,Emergency
Loading