changes to clustering yaml

DendrouLab · Mar 18, 2024 · 2fe7016 · 2fe7016
1 parent 3336992
commit 2fe7016
Showing 1 changed file with 2 additions and 1 deletion.
diff --git a/docs/yaml_docs/pipeline_clustering_yml.md b/docs/yaml_docs/pipeline_clustering_yml.md
@@ -271,5 +271,6 @@ Used to define which metadata columns are used in the visualizations
      - <span class="parameter">rna </span> `String`, Default: logged_counts<br>
      - <span class="parameter">prot </span> `String`, Default: clr<br>
      - <span class="parameter">atac </span> `String`, Default: signac_norm<br>
-     - <span class="parameter">spatial </span> `?`, Default: ?<br> 
+     - <span class="parameter">spatial </span> `String`, Default: None<br> 
+     Options include lognorm and norm_pearson_resid depending what was selected on preprocessing. 
   - <span class="parameter">top_n_markers </span> `Integer`, Default: 10<br>