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bio-la committed Feb 9, 2024
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4 changes: 3 additions & 1 deletion panpipes/panpipes/pipeline_ingest/pipeline.yml
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# ============================================================
# Ingest workflow Panpipes (pipeline_ingest.py)
# ============================================================
# This file contains the parameters for the ingest workflow. For descriptions of the parameters, see the documentation at TODO
# This file contains the parameters for the ingest workflow.
For descriptions of the parameters, see the documentation at TODO


#--------------------------
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# RNA modality Quality Control

# Providing a gene list
# see documentation at https://panpipes-pipelines.readthedocs.io/en/latest/usage/gene_list_format.html#
custom_genes_file: resources/qc_genelist_1.0.csv

# Defining actions on the genes
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