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Merge pull request #225 from DendrouLab/score_gene-correction
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Corrected score_genes default in  pipeline_ingestion_yml.md
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bio-la authored Mar 14, 2024
2 parents fa3dcc8 + 6385ed7 commit 776467d
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4 changes: 2 additions & 2 deletions docs/yaml_docs/pipeline_ingestion_yml.md
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Expand Up @@ -243,8 +243,8 @@ exclude: exclude these genes from the HVG selection, if they are deemed HV.
<span class="parameter">calc_proportions</span> `String` (comma-separated), Default: hb,mt,rp<br>
Specify what gene proportions you want to calculate for each cell (e.g. mt for mitochondrial).

<span class="parameter">score_genes</span> `String`, Default: MarkersNeutro<br>
Specify what genes should be scored.
<span class="parameter">score_genes</span> `String`, Default: (blank) <br>
Specify what genes should be scored.

Furthermore, there is the possibility to define a cell cycle action:

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