adjust sample submission file

DendrouLab · Nov 26, 2024 · 8ab1570 · 8ab1570
1 parent 9acc5d0
commit 8ab1570
Showing 1 changed file with 2 additions and 3 deletions.
diff --git a/.github/workflows/spatial_ingestion_visium-ci.yml b/.github/workflows/spatial_ingestion_visium-ci.yml
@@ -78,12 +78,11 @@ jobs:
       - name: Preparing the submission file
         run: |
           cd spatial/ingestion
-          curl -o sample_file_qc_spatial.txt https://raw.githubusercontent.com/DendrouLab/panpipes-tutorials/main/docs/ingesting_visium_data/sample_file_qc_spatial.txt
-
+          curl -o sample_file_qc_spatial.txt https://raw.githubusercontent.com/DendrouLab/panpipes-tutorials/sarah_spatialData/docs/ingesting_visium_data/sample_file_qc_visium.txt
       - name: Preparing the yaml file
         run: |
           cd spatial/ingestion
-          curl -o pipeline.yml https://raw.githubusercontent.com/DendrouLab/panpipes-tutorials/main/docs/ingesting_visium_data/pipeline.yml
+          curl -o pipeline.yml https://raw.githubusercontent.com/DendrouLab/panpipes-tutorials/sarah_spatialData/docs/ingesting_visium_data/pipeline.yml
 
       - name: File tree
         if: env.debug == 'true'