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curl -L to follow redirects
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kevinrue committed Feb 5, 2024
1 parent a46a822 commit d91ee0b
Showing 1 changed file with 4 additions and 4 deletions.
8 changes: 4 additions & 4 deletions .github/workflows/ingestion-ci.yml
Original file line number Diff line number Diff line change
Expand Up @@ -55,9 +55,9 @@ jobs:
run: |
mkdir -p teaseq/ingest/data.dir
cd teaseq/ingest/data.dir
curl -o adt.h5ad https://figshare.com/ndownloader/files/41671551
curl -o atac.h5ad https://figshare.com/ndownloader/files/41671554
curl -o rna.h5ad https://figshare.com/ndownloader/files/41671557
curl -L -o adt.h5ad https://figshare.com/ndownloader/files/41671551
curl -L -o atac.h5ad https://figshare.com/ndownloader/files/41671554
curl -L -o rna.h5ad https://figshare.com/ndownloader/files/41671557
# Note: we run the following to test that the commands works
# However, the following task will replacing the file anyway
Expand Down Expand Up @@ -85,7 +85,7 @@ jobs:
- name: Replace template contents in configuration file
run: |
cd teaseq/ingest
sed 's+panpipes-tutorials/tutorials/ingesting_data/qc_genelist_1.0.csv+qc_genelist_1.0.csv+g' pipeline.yml
sed -i 's+panpipes-tutorials/tutorials/ingesting_data/qc_genelist_1.0.csv+qc_genelist_1.0.csv+g' pipeline.yml
- name: File tree
if: env.debug == 'true'
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