cd into the expected place

DendrouLab · Feb 5, 2024 · e0f56dc · e0f56dc
1 parent 185be66
commit e0f56dc
Showing 1 changed file with 5 additions and 4 deletions.
diff --git a/.github/workflows/ingestion-ci.yml b/.github/workflows/ingestion-ci.yml
@@ -53,10 +53,11 @@ jobs:
       # Note: all three files are renamed during the download to trim the "subsample_" prefix
       - name: Preparing the data
         run: |
-          mkdir -p teaseq/ingest/data.dir
-          curl -o teaseq/ingest/data.dir/adt.h5ad https://figshare.com/ndownloader/files/41671551
-          curl -o teaseq/ingest/data.dir/atac.h5ad https://figshare.com/ndownloader/files/41671554
-          curl -o teaseq/ingest/data.dir/rna.h5ad https://figshare.com/ndownloader/files/41671557
+          mkdir -p teaseq/ingest && cd teaseq/ingest
+          mkdir data.dir
+          curl -o data.dir/adt.h5ad https://figshare.com/ndownloader/files/41671551
+          curl -o data.dir/atac.h5ad https://figshare.com/ndownloader/files/41671554
+          curl -o data.dir/rna.h5ad https://figshare.com/ndownloader/files/41671557
       
       # Note: we run the following to test that the commands works
       # However, the following task will replacing the file anyway