write default with uniprotID

DessimozLab · Dec 5, 2023 · 1a6f4be · 1a6f4be
1 parent 6560886
commit 1a6f4be
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/FastOMA.nf b/FastOMA.nf
@@ -290,7 +290,7 @@ process collect_subhogs{
                                 --out output_hog.orthoxml \
                                 --marker-groups-fasta OrthologousGroups.tsv \
                                 --roothog-tsv rootHOGs.tsv \
-                                -vv
+                                -vv  --id-transform UniProt
     """
 }