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remove HOG._tax_least -> not used anymore
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alpae committed Sep 19, 2024
1 parent 75e73b0 commit a06e4e3
Showing 1 changed file with 1 addition and 2 deletions.
3 changes: 1 addition & 2 deletions FastOMA/_hog_class.py
Original file line number Diff line number Diff line change
Expand Up @@ -80,7 +80,6 @@ def __init__(self, input_instantiate, taxnomic_range:TreeNode, rhogid:str, msa:O
# 0070124

self._hogid = "HOG_" + self._rhogid+ "_sub" + str(self.__class__._hogid_iter)
self._tax_least = taxnomic_range # least taxnomic level
self._tax_now = taxnomic_range # the taxnomic level that we are considering now, checking for duplication
self.active = True

Expand Down Expand Up @@ -129,7 +128,7 @@ def __init__(self, input_instantiate, taxnomic_range:TreeNode, rhogid:str, msa:O
assert False

def __repr__(self):
return f"<HOG:{self.hogid},size={len(self._members)},taxLeast={self._tax_least.name},taxNow={self._tax_now.name}>"
return f"<HOG:{self.hogid},size={len(self._members)},tax={self._tax_now.name}>"

@property
def hogid(self):
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