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Bump the dev-dependencies group across 1 directory with 11 updates #712

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Bumps the dev-dependencies group with 11 updates in the / directory:

Package From To
intake 0.6.4 2.0.7
ipython 8.18.0 8.29.0
numpy 1.26.4 2.1.3
orderly-set 5.2.2 5.2.3
prompt-toolkit 3.0.36 3.0.48
pydantic-core 2.23.4 2.27.0
pydantic-numpy 5.0.2 6.0.1
tox 3.28.0 4.23.2
workflows 2.28 3.1
zict 2.2.0 3.0.0
zocalo 1.1.1 1.2.0

Updates intake from 0.6.4 to 2.0.7

Commits
  • 5e7b3b8 Merge pull request #845 from jslorrma/fix/sparkdataframe-func-and-deltareader...
  • 9875076 fix: Fix typo in SparkDataFrame and update DeltaReader implements attribute
  • 2d526aa Merge pull request #843 from AlbertDeFusco/feat/llama-server-cache-system-pro...
  • 68b0aae cache system prompt file to disk
  • 913687d Merge pull request #841 from AlbertDeFusco/feat/find-free-port
  • eac67cc Merge pull request #840 from AlbertDeFusco/chore/llama.cpp-short-kwargs
  • 6590c9a start llamacppservice on free port
  • 62c3333 supported short-form kwargs
  • 7874ba1 Merge pull request #842 from AlbertDeFusco/chore/setup-miniconda
  • 117105c swap for conda
  • Additional commits viewable in compare view

Updates ipython from 8.18.0 to 8.29.0

Commits

Updates numpy from 1.26.4 to 2.1.3

Release notes

Sourced from numpy's releases.

2.1.3 (Nov 2, 2024)

NumPy 2.1.3 Release Notes

NumPy 2.1.3 is a maintenance release that fixes bugs and regressions discovered after the 2.1.2 release. This release also adds support for free threaded Python 3.13 on Windows.

The Python versions supported by this release are 3.10-3.13.

Improvements

  • Fixed a number of issues around promotion for string ufuncs with StringDType arguments. Mixing StringDType and the fixed-width DTypes using the string ufuncs should now generate much more uniform results.

    (gh-27636)

Changes

  • numpy.fix now won't perform casting to a floating data-type for integer and boolean data-type input arrays.

    (gh-26766)

Contributors

A total of 15 people contributed to this release. People with a "+" by their names contributed a patch for the first time.

  • Abhishek Kumar +
  • Austin +
  • Benjamin A. Beasley +
  • Charles Harris
  • Christian Lorentzen
  • Marcel Telka +
  • Matti Picus
  • Michael Davidsaver +
  • Nathan Goldbaum
  • Peter Hawkins
  • Raghuveer Devulapalli
  • Ralf Gommers
  • Sebastian Berg
  • dependabot[bot]
  • kp2pml30 +

Pull requests merged

A total of 21 pull requests were merged for this release.

... (truncated)

Changelog

Sourced from numpy's changelog.

This is a walkthrough of the NumPy 2.1.0 release on Linux, modified for building with GitHub Actions and cibuildwheels and uploading to the anaconda.org staging repository for NumPy <https://anaconda.org/multibuild-wheels-staging/numpy>_. The commands can be copied into the command line, but be sure to replace 2.1.0 by the correct version. This should be read together with the :ref:general release guide <prepare_release>.

Facility preparation

Before beginning to make a release, use the requirements/*_requirements.txt files to ensure that you have the needed software. Most software can be installed with pip, but some will require apt-get, dnf, or whatever your system uses for software. You will also need a GitHub personal access token (PAT) to push the documentation. There are a few ways to streamline things:

  • Git can be set up to use a keyring to store your GitHub personal access token. Search online for the details.
  • You can use the keyring app to store the PyPI password for twine. See the online twine documentation for details.

Prior to release

Add/drop Python versions

When adding or dropping Python versions, three files need to be edited:

  • .github/workflows/wheels.yml # for github cibuildwheel
  • tools/ci/cirrus_wheels.yml # for cibuildwheel aarch64/arm64 builds
  • pyproject.toml # for classifier and minimum version check.

Make these changes in an ordinary PR against main and backport if necessary. Add [wheel build] at the end of the title line of the commit summary so that wheel builds will be run to test the changes. We currently release wheels for new Python versions after the first Python rc once manylinux and cibuildwheel support it. For Python 3.11 we were able to release within a week of the rc1 announcement.

Backport pull requests

Changes that have been marked for this release must be backported to the maintenance/2.1.x branch.

Update 2.1.0 milestones

... (truncated)

Commits
  • 98464cc Merge pull request #27690 from charris/prepare-2.1.3
  • cbda85b REL: Prepare for the NumPy 2.1.3 release [wheel build]
  • daa8699 Merge pull request #27672 from charris/backport-27666
  • 614ca19 Merge pull request #27673 from charris/backport-27636
  • e6b02d7 DOC: add release note
  • 54fd729 BUG: substantially simplify and fix issue with justification promoter
  • a90fe7c BUG: fix more issues with string ufunc promotion
  • a121864 BUG: fixes for StringDType/unicode promoters
  • f055fb9 BUG: Fix a reference count leak in npy_find_descr_for_scalar.
  • 5895c02 Merge pull request #27669 from charris/backport-27663
  • Additional commits viewable in compare view

Updates orderly-set from 5.2.2 to 5.2.3

Commits

Updates prompt-toolkit from 3.0.36 to 3.0.48

Release notes

Sourced from prompt-toolkit's releases.

3.0.48

Fixes:

  • Typing improvements:
    • Add @overload to contrib.regular_languages.compiler.Variables.get.
    • Use Sequence instead of list for words argument in completers.
  • Improve ModalCursorShapeConfig:
    • Display an "underscore" cursor in Vi's "replace single" mode, like "replace" mode.
    • Display an "beam" cursor in Emacs (insert) mode.

3.0.47

New features:

  • Allow passing exception classes for KeyboardInterrupt and EOFError in PromptSession.

Fixes:

  • Compute padding parameters for Box widget lazily.

3.0.46

Fixes:

  • Fix pytest capsys fixture compatibility.

3.0.45

Fixes:

  • Improve performance of GrammarCompleter (faster deduplication of completions).

3.0.44

New features:

  • Accept os.PathLike in FileHistory (typing fix).

Fixes:

  • Fix memory leak in filters.
  • Improve performance of progress bar formatters.
  • Fix compatibility when a SIGINT handler is installed by non-Python (Rust, C).
  • Limit number of completions in buffer to 10k by default (for performance).

3.0.43

Fixes regression from 3.0.42:

  • Fix regression on Pypy: Don't use ctypes.pythonapi to restore SIGINT if not available.

Other changes from 3.0.42:

  • Fix line wrapping in patch_stdout on Windows.
  • Make formatted_text.split_lines() accept an iterable instead of lists only.
  • Disable the IPython workaround (from 3.0.41) for IPython >= 8.18.
  • Restore signal.SIGINT handler between prompts
Changelog

Sourced from prompt-toolkit's changelog.

3.0.48: 2024-09-25

Fixes:

  • Typing improvements:
    • Add @overload to contrib.regular_languages.compiler.Variables.get.
    • Use Sequence instead of list for words argument in completers.
  • Improve ModalCursorShapeConfig:
    • Display an "underscore" cursor in Vi's "replace single" mode, like "replace" mode.
    • Display an "beam" cursor in Emacs (insert) mode.

3.0.47: 2024-06-10

New features:

  • Allow passing exception classes for KeyboardInterrupt and EOFError in PromptSession.

Fixes:

  • Compute padding parameters for Box widget lazily.

3.0.46: 2024-06-04

Fixes:

  • Fix pytest capsys fixture compatibility.

3.0.45: 2024-05-28

Fixes:

  • Improve performance of GrammarCompleter (faster deduplication of completions).

3.0.44: 2024-05-27

New features:

  • Accept os.PathLike in FileHistory (typing fix).

Fixes:

  • Fix memory leak in filters.
  • Improve performance of progress bar formatters.
  • Fix compatibility when a SIGINT handler is installed by non-Python (Rust, C).
  • Limit number of completions in buffer to 10k by default (for performance).

... (truncated)

Commits
  • 435bd99 Release 3.0.48
  • ae1d635 Fixup for previous cursorshapes commit (#1900). (#1920)
  • df4e244 Update type definition for words argument in completers (#1889)
  • 728983b Improve ModalCursorShapeConfig for various input modes (#1900)
  • 75615b1 Add @​overload to contrib.regular_languages.compiler.Variables.get
  • 6695411 Release 3.0.47
  • 67e644b Small simplification in Screen code.
  • 8889675 fix(Examples): address a typo in one of the examples
  • 15f3aec Allow passing exception classes for KeyboardInterrupt and EOFError in PromptS...
  • a04c37d Compute padding parameters for Box widget lazily.
  • Additional commits viewable in compare view

Updates pydantic-core from 2.23.4 to 2.27.0

Release notes

Sourced from pydantic-core's releases.

v2.27.0 2024-11-12

What's Changed

New Contributors

Full Changelog: pydantic/pydantic-core@v2.26.0...v2.27.0

v2.26.0 2024-11-04

What's Changed

Fixes

Packaging

New Features

New Contributors

Full Changelog: pydantic/pydantic-core@v2.25.1...v2.26.0

v2.25.1 2024-10-30

What's Changed

New Contributors

... (truncated)

Commits
  • 061711f Prep for v2.27.0 release (#1541)
  • be03c66 support trailing-strings with allow_partial (#1539)
  • a3f13c7 fix wrap serializer breaking union serialization in presence of extra field...
  • cd0346d More union serialization tidying (#1536)
  • cd270e4 Fix _IncEx type alias to be compatible with mypy (#1537)
  • 2419981 fix(union_serializer): do not raise warnings in nested unions (#1513)
  • 4cb82bf fix panic in validate_assignment when field has gone missing (#1532)
  • 085e61d Remove Url and MultiHostUrl docstrings, we moved them to pydantic (#1531)
  • 815d224 Bump the python-packages group across 1 directory with 7 updates (#1529)
  • 96038dd Bump version to prep release (#1527)
  • Additional commits viewable in compare view

Updates pydantic-numpy from 5.0.2 to 6.0.1

Commits

Updates tox from 3.28.0 to 4.23.2

Release notes

Sourced from tox's releases.

4.23.2

What's Changed

New Contributors

Full Changelog: tox-dev/tox@4.23.1...4.23.2

4.23.1

What's Changed

New Contributors

Full Changelog: tox-dev/tox@4.23.0...4.23.1

4.23.0

What's Changed

New Contributors

Full Changelog: tox-dev/tox@4.22.0...4.23.0

4.22.0

What's Changed

Full Changelog: tox-dev/tox@4.21.2...4.22.0

4.21.2

... (truncated)

Changelog

Sourced from tox's changelog.

v4.23.2 (2024-10-22)

Misc - 4.23.2

- :issue:`3415`

v4.23.1 (2024-10-21)


Improved Documentation - 4.23.1

  • Fix bad example in documentation for dependency groups - by :user:gaborbernat. (:issue:3240)

v4.23.0 (2024-10-16)

Features - 4.23.0

- Add ``NETRC`` to the list of environment variables always passed through. (:issue:`3410`)

Improved Documentation - 4.23.0

  • replace [tool.pyproject] and [tool.tox.pyproject] with [tool.tox] in config.rst (:issue:3411)

v4.22.0 (2024-10-15)

Features - 4.22.0

- Implement dependency group support as defined in :pep:`735` - see :ref:`dependency_groups` - by :user:`gaborbernat`. (:issue:`3408`)

v4.21.2 (2024-10-03)


Bugfixes - 4.21.2

  • Include tox.toml in sdist archives to fix test failures resulting from its lack.
    • by :user:mgorny (:issue:3389)

v4.21.1 (2024-10-02)

Bugfixes - 4.21.1

- Fix error when using ``requires`` within a TOML configuration file - by :user:`gaborbernat`. (:issue:`3386`)
- Fix error when using ``deps`` within a TOML configuration file - by :user:`gaborbernat`. (:issue:`3387`)
- Multiple fixes for the TOML configuration by :user:`gaborbernat`.:

    

  • Do not fail when there is an empty command within commands.
</tr></table>

... (truncated)

Commits

Updates workflows from 2.28 to 3.1

Commits
  • cbad0e0 Bump version: 3.0 → 3.1
  • 3d79451 More verbosely log unknown errors in PikaTransport (#186)
  • 63b09ff Bump version: 2.28 → 3.0
  • 9d56ce4 Sample pipethrough (#156)
  • 5d06b25 log an error if the recipe wrapper recieves a message that is not a recipe (#...
  • bf5c890 chore(deps): update pypa/gh-action-pypi-publish digest to fb13cb3 (#178)
  • 281dd60 Update python minimum to 3.10, remove pkg_resources (#184)
  • 5872b45 Don't run mypy on the live pre-commit
  • 46db2c1 Remove replaces azure pipelines
  • See full diff in compare view

Updates zict from 2.2.0 to 3.0.0

Updates zocalo from 1.1.1 to 1.2.0

Commits

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@dependabot
Bump the dev-dependencies group across 1 directory with 11 updates
ad8ede2 
Bumps the dev-dependencies group with 11 updates in the / directory:

| Package | From | To |
| --- | --- | --- |
| [intake](https://github.com/intake/intake) | `0.6.4` | `2.0.7` |
| [ipython](https://github.com/ipython/ipython) | `8.18.0` | `8.29.0` |
| [numpy](https://github.com/numpy/numpy) | `1.26.4` | `2.1.3` |
| [orderly-set](https://github.com/seperman/orderly-set) | `5.2.2` | `5.2.3` |
| [prompt-toolkit](https://github.com/prompt-toolkit/python-prompt-toolkit) | `3.0.36` | `3.0.48` |
| [pydantic-core](https://github.com/pydantic/pydantic-core) | `2.23.4` | `2.27.0` |
| [pydantic-numpy](https://github.com/caniko/pydantic-numpy) | `5.0.2` | `6.0.1` |
| [tox](https://github.com/tox-dev/tox) | `3.28.0` | `4.23.2` |
| [workflows](https://github.com/DiamondLightSource/python-workflows) | `2.28` | `3.1` |
| [zict](http://zict.readthedocs.io/en/latest/) | `2.2.0` | `3.0.0` |
| [zocalo](https://github.com/DiamondLightSource/python-zocalo) | `1.1.1` | `1.2.0` |



Updates `intake` from 0.6.4 to 2.0.7
- [Commits](intake/intake@0.6.4...2.0.7)

Updates `ipython` from 8.18.0 to 8.29.0
- [Release notes](https://github.com/ipython/ipython/releases)
- [Commits](ipython/ipython@8.18.0...8.29.0)

Updates `numpy` from 1.26.4 to 2.1.3
- [Release notes](https://github.com/numpy/numpy/releases)
- [Changelog](https://github.com/numpy/numpy/blob/main/doc/RELEASE_WALKTHROUGH.rst)
- [Commits](numpy/numpy@v1.26.4...v2.1.3)

Updates `orderly-set` from 5.2.2 to 5.2.3
- [Release notes](https://github.com/seperman/orderly-set/releases)
- [Changelog](https://github.com/seperman/orderly-set/blob/master/CHANGELOG.md)
- [Commits](https://github.com/seperman/orderly-set/commits)

Updates `prompt-toolkit` from 3.0.36 to 3.0.48
- [Release notes](https://github.com/prompt-toolkit/python-prompt-toolkit/releases)
- [Changelog](https://github.com/prompt-toolkit/python-prompt-toolkit/blob/master/CHANGELOG)
- [Commits](prompt-toolkit/python-prompt-toolkit@3.0.36...3.0.48)

Updates `pydantic-core` from 2.23.4 to 2.27.0
- [Release notes](https://github.com/pydantic/pydantic-core/releases)
- [Commits](pydantic/pydantic-core@v2.23.4...v2.27.0)

Updates `pydantic-numpy` from 5.0.2 to 6.0.1
- [Commits](https://github.com/caniko/pydantic-numpy/commits)

Updates `tox` from 3.28.0 to 4.23.2
- [Release notes](https://github.com/tox-dev/tox/releases)
- [Changelog](https://github.com/tox-dev/tox/blob/main/docs/changelog.rst)
- [Commits](tox-dev/tox@3.28.0...4.23.2)

Updates `workflows` from 2.28 to 3.1
- [Commits](DiamondLightSource/python-workflows@v2.28...v3.1)

Updates `zict` from 2.2.0 to 3.0.0

Updates `zocalo` from 1.1.1 to 1.2.0
- [Changelog](https://github.com/DiamondLightSource/python-zocalo/blob/main/HISTORY.rst)
- [Commits](DiamondLightSource/python-zocalo@v1.1.1...v1.2.0)

---
updated-dependencies:
- dependency-name: intake
  dependency-type: direct:development
  update-type: version-update:semver-major
  dependency-group: dev-dependencies
- dependency-name: ipython
  dependency-type: direct:development
  update-type: version-update:semver-minor
  dependency-group: dev-dependencies
- dependency-name: numpy
  dependency-type: direct:development
  update-type: version-update:semver-major
  dependency-group: dev-dependencies
- dependency-name: orderly-set
  dependency-type: direct:development
  update-type: version-update:semver-patch
  dependency-group: dev-dependencies
- dependency-name: prompt-toolkit
  dependency-type: direct:development
  update-type: version-update:semver-patch
  dependency-group: dev-dependencies
- dependency-name: pydantic-core
  dependency-type: direct:development
  update-type: version-update:semver-minor
  dependency-group: dev-dependencies
- dependency-name: pydantic-numpy
  dependency-type: direct:development
  update-type: version-update:semver-major
  dependency-group: dev-dependencies
- dependency-name: tox
  dependency-type: direct:development
  update-type: version-update:semver-major
  dependency-group: dev-dependencies
- dependency-name: workflows
  dependency-type: direct:development
  update-type: version-update:semver-major
  dependency-group: dev-dependencies
- dependency-name: zict
  dependency-type: direct:development
  update-type: version-update:semver-major
  dependency-group: dev-dependencies
- dependency-name: zocalo
  dependency-type: direct:development
  update-type: version-update:semver-minor
  dependency-group: dev-dependencies
...

Signed-off-by: dependabot[bot] <[email protected]>
@dependabot dependabot bot added dependencies Pull requests that update a dependency file python Pull requests that update Python code labels Nov 14, 2024
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dependabot bot commented on behalf of github Nov 15, 2024

Looks like these dependencies are updatable in another way, so this is no longer needed.

@dependabot dependabot bot closed this Nov 15, 2024
@dependabot dependabot bot deleted the dependabot/pip/dev-dependencies-322610b80e branch November 15, 2024 13:20
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