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Pypi upload compatible version #33

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Dec 21, 2024
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3 changes: 2 additions & 1 deletion .github/workflows/tests.yml
Original file line number Diff line number Diff line change
Expand Up @@ -34,7 +34,8 @@ jobs:
pip install git+https://github.com/MP-Gadget/pfft-python
pip install git+https://github.com/MP-Gadget/pmesh
pip install git+https://github.com/ASKabalan/fastpm-python --no-build-isolation
pip install .[test]
pip install -r requirements-test.txt
pip install .

- name: Run Single Device Tests
run: |
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3 changes: 3 additions & 0 deletions .gitignore
Original file line number Diff line number Diff line change
Expand Up @@ -132,3 +132,6 @@ dmypy.json

# Pyre type checker
.pyre/

# Hide version file
_version.py
2 changes: 1 addition & 1 deletion LICENSE
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
MIT License

Copyright (c) 2021 Differentiable Universe Initiative
Copyright (c) 2021-2025 Differentiable Universe Initiative

Permission is hereby granted, free of charge, to any person obtaining a copy
of this software and associated documentation files (the "Software"), to deal
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2 changes: 2 additions & 0 deletions MANIFEST.in
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@@ -0,0 +1,2 @@
prune notebooks
prune tests
11 changes: 10 additions & 1 deletion README.md
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@@ -1,9 +1,18 @@
# JaxPM
[![Tests](https://github.com/DifferentiableUniverseInitiative/JaxPM/actions/workflows/tests.yml/badge.svg)](https://github.com/DifferentiableUniverseInitiative/JaxPM/actions/workflows/tests.yml) <!-- ALL-CONTRIBUTORS-BADGE:START - Do not remove or modify this section -->
[![PyPI version](https://img.shields.io/pypi/v/jaxpm)](https://pypi.org/project/jaxpm/) [![Tests](https://github.com/DifferentiableUniverseInitiative/JaxPM/actions/workflows/tests.yml/badge.svg)](https://github.com/DifferentiableUniverseInitiative/JaxPM/actions/workflows/tests.yml) <!-- ALL-CONTRIBUTORS-BADGE:START - Do not remove or modify this section -->
[![All Contributors](https://img.shields.io/badge/all_contributors-5-orange.svg?style=flat-square)](#contributors-)
<!-- ALL-CONTRIBUTORS-BADGE:END -->
JAX-powered Cosmological Particle-Mesh N-body Solver

## Install

Basic installation can be done using pip:
```bash
pip install jaxpm
```
For more advanced installation for optimized distribution on gpu clusters, please install jaxDecomp first. See instructions [here](https://github.com/DifferentiableUniverseInitiative/jaxDecomp).


## Goals

Provide a modern infrastructure to support differentiable PM N-body simulations using JAX:
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15 changes: 1 addition & 14 deletions pyproject.toml
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Expand Up @@ -3,7 +3,7 @@ requires = ["setuptools", "wheel", "setuptools-scm"]
build-backend = "setuptools.build_meta"

[project]
name = "JaxPM"
name = "jaxpm"
dynamic = ["version"]
description = "A simple Particle-Mesh implementation in JAX"
authors = [{ name = "JaxPM developers" }]
Expand All @@ -13,19 +13,6 @@ license = { file = "LICENSE" }
urls = { "Homepage" = "https://github.com/DifferentiableUniverseInitiative/JaxPM" }
dependencies = ["jax_cosmo", "jax>=0.4.30", "jaxdecomp>=0.2.2"]

[project.optional-dependencies]
test = [
"jax>=0.4.30",
"numpy",
"jax_cosmo",
"jaxdecomp>=0.2.2",
"pytest>=8.0.0",
"pfft-python @ git+https://github.com/MP-Gadget/pfft-python",
"pmesh @ git+https://github.com/MP-Gadget/pmesh",
"fastpm @ git+https://github.com/ASKabalan/fastpm-python",
"diffrax"
]

[tool.setuptools]
packages = ["jaxpm"]

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5 changes: 5 additions & 0 deletions requirements-test.txt
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@@ -0,0 +1,5 @@
pytest>=8.0.0
diffrax
pfft-python @ git+https://github.com/MP-Gadget/pfft-python
pmesh @ git+https://github.com/MP-Gadget/pmesh
fastpm @ git+https://github.com/ASKabalan/fastpm-python
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