QPFSLASSO

QPFSLASSO: a specific gene selector for multiple conditions

INSTALL

For install, first download the git repository:

git clone https://github.com/DonQwerty/QPFSLASSO.git

After that, you only need to install the package:

R CMD INSTALL QPFSLASSO/QPFSLASSO-package

Dependencies

The follow packeges are needed for executing QPFSLASSO:

• dplyr
• doMC
• stringr
• data.table
• pbapply
• entropy
• edgeR
• TCC
• ggplot2
• ballgown
• quadprog

Example

library(QPFSLASSO)
data(genes)
weights<-QPFSLASSO(genes,"type","control")
plot(weights)