Changed lat/lon handling

EBI-Metagenomics · Jul 23, 2024 · 28e7648 · 28e7648
1 parent 98f981b
commit 28e7648
Showing 1 changed file with 8 additions and 2 deletions.
diff --git a/genomeuploader/genome_upload.py b/genomeuploader/genome_upload.py
@@ -494,12 +494,18 @@ def combine_ENA_info(genomeInfo, ENADict):
             latitude = latitList[0]
             if multipleElementSet(latitList):
                 latitude = "not provided"
-            genomeInfo[g]["latitude"] = str(round(float(latitude), GEOGRAPHY_DIGIT_COORDS))
+            try:
+                genomeInfo[g]["latitude"] = str(round(float(latitude), GEOGRAPHY_DIGIT_COORDS))
+            except ValueError:
+                genomeInfo[g]["latitude"] = "not provided"
 
             longitude = longList[0]
             if multipleElementSet(longList):
                 longitude = "not provided"
-            genomeInfo[g]["longitude"] = str(round(float(longitude), GEOGRAPHY_DIGIT_COORDS))
+            try:
+                genomeInfo[g]["longitude"] = str(round(float(longitude), GEOGRAPHY_DIGIT_COORDS))
+            except ValueError:
+                genomeInfo[g]["longitude"] = "not provided"
 
             samples = samplesList[0]
             if multipleElementSet(samplesList):