Added a fix for collection date format

EBI-Metagenomics · Jul 23, 2024 · e0f5bcd · e0f5bcd · Ge94 · Jul 23, 2024
1 parent 15b98b1
commit e0f5bcd
Showing 1 changed file with 2 additions and 0 deletions.
diff --git a/genomeuploader/genome_upload.py b/genomeuploader/genome_upload.py
@@ -480,6 +480,8 @@ def combine_ENA_info(genomeInfo, ENADict):
             collectionDate = collectionList[0]
             if multipleElementSet(collectionList):
                 collectionDate = "not provided"
+            if collectionDate.lower() == "not applicable":
+                collectionDate = "not provided"
             genomeInfo[g]["collectionDate"] = collectionDate
 
             country = countryList[0]