Added single cell library construction terms for #2202

EBISPOT · Apr 23, 2024 · f9d36be · f9d36be
1 parent f4e446a
commit f9d36be
Showing 1 changed file with 41 additions and 1 deletion.
diff --git a/src/ontology/efo-edit.owl b/src/ontology/efo-edit.owl
@@ -16983,6 +16983,10 @@ Declaration(Class(efo:EFO_0022596))
 Declaration(Class(efo:EFO_0022597))
 Declaration(Class(efo:EFO_0022598))
 Declaration(Class(efo:EFO_0022599))
+Declaration(Class(efo:EFO_0022600))
+Declaration(Class(efo:EFO_0022601))
+Declaration(Class(efo:EFO_0022602))
+Declaration(Class(efo:EFO_0022603))
 Declaration(Class(efo:EFO_0030000))
 Declaration(Class(efo:EFO_0030001))
 Declaration(Class(efo:EFO_0030002))
@@ -29547,7 +29551,7 @@ AnnotationAssertion(rdfs:label obo:RO_0001025 "located_in")
 
 AnnotationAssertion(rdfs:label obo:RO_0002104 "has_plasma_membrane_part")
 
-# Object Property: obo:RO_0002160 (only_in_taxon)
+# Object Property: obo:RO_0002160 (only in taxon)
 
 AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:20973947") obo:IAO_0000115 obo:RO_0002160 "S only_in_taxon T iff: S SubClassOf in_taxon only T")
 AnnotationAssertion(oboInOwl:hasDbXref obo:RO_0002160 "RO:0002160")
@@ -204328,6 +204332,42 @@ AnnotationAssertion(rdfs:label efo:EFO_0022599 "DNA methylation"@en)
 SubClassOf(efo:EFO_0022599 obo:GO_0006139)
 SubClassOf(efo:EFO_0022599 obo:GO_0043412)
 
+# Class: efo:EFO_0022600 (Parse Evercode Whole Transcriptome v1)
+
+AnnotationAssertion(Annotation(efo:definition_citation "https://www.biorxiv.org/content/10.1101/2022.08.27.505512v1.full") Annotation(efo:definition_citation "https://www.parsebiosciences.com") obo:IAO_0000115 efo:EFO_0022600 "Parse Evercode WT v1: Parse Biosciences single cell sequencing that utilizes combinatorial split-pool barcoding based off of SPLiT-seq.")
+AnnotationAssertion(dc:creator efo:EFO_0022600 "Zoe May Pendlington")
+AnnotationAssertion(dc:date efo:EFO_0022600 "2024-04-23T09:41:07Z"^^xsd:dateTime)
+AnnotationAssertion(oboInOwl:hasExactSynonym efo:EFO_0022600 "Parse Evercode WT v1")
+AnnotationAssertion(rdfs:label efo:EFO_0022600 "Parse Evercode Whole Transcriptome v1"@en)
+SubClassOf(efo:EFO_0022600 efo:EFO_0022603)
+
+# Class: efo:EFO_0022601 (Parse Evercode Whole Transcriptome v2)
+
+AnnotationAssertion(Annotation(efo:definition_citation "https://www.biorxiv.org/content/10.1101/2022.08.27.505512v1.full") Annotation(efo:definition_citation "https://www.parsebiosciences.com") obo:IAO_0000115 efo:EFO_0022601 "Parse Evercode WT v2: Parse Biosciences single cell sequencing that utilizes combinatorial split-pool barcoding based off of SPLiT-seq.")
+AnnotationAssertion(dc:creator efo:EFO_0022601 "Zoe May Pendlington")
+AnnotationAssertion(dc:date efo:EFO_0022601 "2024-04-23T09:42:46Z"^^xsd:dateTime)
+AnnotationAssertion(oboInOwl:hasExactSynonym efo:EFO_0022601 "Parse Evercode WT v2")
+AnnotationAssertion(rdfs:label efo:EFO_0022601 "Parse Evercode Whole Transcriptome v2"@en)
+SubClassOf(efo:EFO_0022601 efo:EFO_0022603)
+
+# Class: efo:EFO_0022602 (Parse Evercode Whole Transcriptome v3)
+
+AnnotationAssertion(Annotation(efo:definition_citation "https://www.biorxiv.org/content/10.1101/2022.08.27.505512v1.full") Annotation(efo:definition_citation "https://www.parsebiosciences.com") obo:IAO_0000115 efo:EFO_0022602 "Parse Evercode WT v3: Parse Biosciences single cell sequencing that utilizes combinatorial split-pool barcoding based off of SPLiT-seq.")
+AnnotationAssertion(dc:creator efo:EFO_0022602 "Zoe May Pendlington")
+AnnotationAssertion(dc:date efo:EFO_0022602 "2024-04-23T09:43:58Z"^^xsd:dateTime)
+AnnotationAssertion(oboInOwl:hasExactSynonym efo:EFO_0022602 "Parse Evercode WT v3")
+AnnotationAssertion(rdfs:label efo:EFO_0022602 "Parse Evercode Whole Transcriptome v3"@en)
+SubClassOf(efo:EFO_0022602 efo:EFO_0022603)
+
+# Class: efo:EFO_0022603 (Parse Biosciences technology)
+
+AnnotationAssertion(Annotation(efo:definition_citation "https://www.biorxiv.org/content/10.1101/2022.08.27.505512v1.full") Annotation(efo:definition_citation "https://www.parsebiosciences.com/") obo:IAO_0000115 efo:EFO_0022603 "Parse Biosciences single cell sequencing that utilizes combinatorial split-pool barcoding based off of SPLiT-seq.")
+AnnotationAssertion(dc:creator efo:EFO_0022603 "Zoe May Pendlington")
+AnnotationAssertion(dc:date efo:EFO_0022603 "2024-04-23T09:45:32Z"^^xsd:dateTime)
+AnnotationAssertion(rdfs:label efo:EFO_0022603 "Parse Biosciences technology"@en)
+SubClassOf(efo:EFO_0022603 efo:EFO_0009919)
+SubClassOf(efo:EFO_0022603 efo:EFO_0010183)
+
 # Class: efo:EFO_0030000 (STARmap)
 
 AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:29930089") Annotation(oboInOwl:hasDbXref "https://orcid.org/0000-0002-3090-9894") obo:IAO_0000115 efo:EFO_0030000 "STARmap is an image-based technology for 3D intact-tissue RNA sequencing, which integrates hydrogel-tissue chemistry, targeted signal amplification, and in situ sequencing.")