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Update ebi_ontologies.json
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- Remove GAZ override for PURL
- Update TEDDY config for PURL to point to nfs file in codon
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@serjoshua
serjoshua authored Aug 3, 2023
1 parent 6a36f38 commit e78cef1
Showing 1 changed file with 2 additions and 3 deletions.
5 changes: 2 additions & 3 deletions ebi_ontologies.json
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Original file line number Diff line number Diff line change
Expand Up @@ -250,7 +250,7 @@
"http://identifiers.org/teddy/TEDDY_"
],
"oboSlims": false,
"ontology_purl": "http://www.biomodels.net/teddy/TEDDY"
"ontology_purl": "file:///nfs/production/parkinso/spot/ols4/prod/local_ontologies/teddy-inferred.owl"
},
{
"id": "edam",
Expand Down Expand Up @@ -985,7 +985,7 @@
],
"reasoner": "EL",
"oboSlims": false,
"ontology_purl": "file:///nfs/production/parkinso/spot/ols4/dev/local_ontologies/snomed.owl",
"ontology_purl": "file:///nfs/production/parkinso/spot/ols4/prod/local_ontologies/snomed.owl",
"allow_download": false
},
{
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},
{
"id":"gaz",
"ontology_purl":"http://purl.obolibrary.org/obo/gaz.obo",
"hierarchical_property":[
"http://purl.obolibrary.org/obo/BFO_0000050",
"http://purl.obolibrary.org/obo/RO_0001025",
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2 comments on commit e78cef1

@serjoshua
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I forgot to create a pull request @henrietteharmse @udp but I updated GAZ to not use the OBO override because in the foundry config, it is already pointing to a proper OWL file. Also, I updated TEDDY to point to our local_ontologies directory in codon.

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fix for ontologies in #453

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