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Releases: EBIvariation/CMAT

v3.0.3

18 Sep 10:21
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  • Add latest mappings and include date generated
  • Update to primary documentation
  • Bugfixes

v3.0.2

07 Aug 08:42
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  • Updates for CMAT evaluation counts
  • Bump OT JSON schema version

v3.0.1

24 Jul 10:48
5bbf36d
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Update to OLS4 and Ensembl 110

v3.0.0

06 Jun 10:31
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  • Major code refactor - all code centralised under cmat module
  • Fix to counting in repeat expansion pipeline
  • Add obsolete checks and suggested replacement terms to manual curation

v2.8.0

26 Apr 08:25
b1778c9
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  • Add ability to generate annotated XML along with metrics
  • Update documentation for manual curation
  • Various bugfixes and improvements

v2.7.3

25 Jan 08:46
8ddf9f4
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Final bugfixes for Feb 2023 submission

v2.7.2

23 Jan 10:41
787f269
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Bump OT JSON schema version and adjust requirements slightly.

v2.7.1

09 Jan 10:26
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  • Parse multiple names/identifiers in repeat expansion pipeline
  • Include previous curator comments in "Notes" column for manual curation

v2.7.0

31 Oct 10:15
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  • End-to-end tests for evidence string pipeline
  • Automated deployment to EBI cluster
  • Automation in Nextflow of technical steps in manual curation protocol
  • Update ClinVar variant types diagrams, plus other investigations
  • Bump OT schema version in preparation for November submission

v2.6.0

05 Sep 13:22
0fd4fab
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Merge pull request #337 from apriltuesday/issue-333

Convert evidence string generation to Nextflow