v3.3.1

What's Changed

• Issue 434: Add VCV IDs to evidence strings by @apriltuesday in #444
• Update for Ensembl 113

Full Changelog: v3.3.0...v3.3.1

v3.3.0

What's Changed

• Remove obsolete review statement by @tcezard in #441
• Model for ClinVar submitted records (SCVs) by @apriltuesday in #442
• Issue 435: Filter gene-related disorder submission from curation and evidence generation by @apriltuesday in #443

Full Changelog: v3.2.2...v3.3.0

v3.2.2

What's Changed

• Bump versions for 24.09 submission by @apriltuesday in #439
• Fix issue in counts by @apriltuesday in #440

Full Changelog: v3.2.1...v3.2.2

v3.2.1

What's Changed

• bump requests to 2.32.3 by @apriltuesday in #437

Full Changelog: v3.2.0...v3.2.1

v3.2.0

What's Changed

• Issue 391 - Updates to EFO feedback processing by @apriltuesday in #430
• Bump requests from 2.31.0 to 2.32.0 by @dependabot in #431
• Issue 396 - Migrate to ClinVar XML V2 by @apriltuesday in #432
  • Code should be backwards compatible

Full Changelog: v3.1.3...v3.2.0

v3.1.3

What's Changed

• Ensure complete counts report is output to logs dir by @apriltuesday in #426
• Bump OT JSON schema

Full Changelog: v3.1.2...v3.1.3

v3.1.2

What's Changed

• Continue parsing records when exceptions occur in evidence generation by @apriltuesday in #418
• Modify counts for when evidence is invalid by @apriltuesday in #419
• Issue 416 - Parallelise evidence string generation by @apriltuesday in #421
• Add labels to nextflow processes for slurm migration by @apriltuesday in #424

Full Changelog: v3.1.1...v3.1.2

v3.1.1

• Add conda installation documentation
• Update for Ensembl 111
• Update manual curation SOP
• Improve automated mappings for exact string matches and replacement terms

v3.1.0

• Add conda recipe and wrapper script
• Add flag to include transcript IDs with consequence predictions
• Allow alternate target ontologies in curation and annotation pipelines
• Bug fixes and new end-to-end tests

v3.0.5

Add releaseDate to evidence string
Bugfixes for manual curation pipelines