Merge pull request #6 from tcezard/EVA3286_fix_missing_parameter

EVA3286 - Set the output folder parameter
EBIvariation · Jun 14, 2023 · 0086ed7 · 0086ed7
2 parents 3ba3053 + 6dc3d54
commit 0086ed7
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Showing 2 changed files with 3 additions and 2 deletions.
diff --git a/eva_assembly_ingestion/assembly_ingestion_job.py b/eva_assembly_ingestion/assembly_ingestion_job.py
@@ -218,7 +218,8 @@ def check_remapping_required(self, source_assembly):
     def create_extraction_properties(self, output_file_path, source_assembly):
         properties = self.properties_generator.get_remapping_extraction_properties(
             taxonomy=self.taxonomy,
-            source_assembly=source_assembly
+            source_assembly=source_assembly,
+            output_folder='.',
         )
         with open(output_file_path, 'w') as open_file:
             open_file.write(properties)

diff --git a/requirements.txt b/requirements.txt
@@ -1,4 +1,4 @@
-ebi-eva-common-pyutils==0.5.3
+ebi-eva-common-pyutils==0.5.5
 pyyaml
 requests
 retry