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EVA-3308 Support multiple taxonomy ids when remapping #10

Merged
merged 8 commits into from
Jan 15, 2024
Merged

EVA-3308 Support multiple taxonomy ids when remapping #10

merged 8 commits into from
Jan 15, 2024

Commits on Dec 20, 2023

  1. First path at adding multy taxonomy support

    @tcezard
    tcezard committed Dec 20, 2023
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Commits on Jan 5, 2024

  1. Nextflow pipeline remap for multiple taxonomies

    @tcezard
    tcezard committed Jan 5, 2024
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  2. Remove unused function

    @tcezard
    tcezard committed Jan 5, 2024
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  3. Add taxonomy in the extraction log file name

    @tcezard
    tcezard committed Jan 5, 2024
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Commits on Jan 8, 2024

  1. Fixes from testing

    @tcezard
    tcezard committed Jan 8, 2024
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  2. Add counts specific to taxonomy

    @tcezard
    tcezard committed Jan 8, 2024
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  3. use the taxonomy parameter

    @tcezard
    tcezard committed Jan 8, 2024
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Commits on Jan 15, 2024

  1. switch to using the source taxonomy

    @tcezard
    tcezard committed Jan 15, 2024
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