EVA-3323 Count remapped variants from logs only if remapping was done #7
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apriltuesday
approved these changes
Sep 25, 2023
| @@ -210,7 +211,10 @@ def process_one_assembly(self, source_assembly, instance, resume): | |||
| finally: | |||
| os.chdir(curr_working_dir) | |||
| self.set_status_end(source_assembly) | |||
| self.count_variants_from_logs(assembly_directory, source_assembly) | |||
| if remapping_required: | |||
| self.count_variants_from_logs(assembly_directory, source_assembly, remapping_required) | |||
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Suggested change
| self.count_variants_from_logs(assembly_directory, source_assembly, remapping_required) | |
| self.count_variants_from_logs(assembly_directory, source_assembly) |
tcezard
approved these changes
Sep 25, 2023
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