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@EESI

Drexel's EESI Lab.

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  1. themetagenomics themetagenomics Public

    R 23 4

  2. PyFeast PyFeast Public

    A Python interface to the Feature Selection Toolkit, contains JMI, BetaGamma, CMIM, CondMI, DISR, ICAP, and mRMR

    Python 19 3

  3. microbiome_embeddings microbiome_embeddings Public

    Python 10 2

  4. ISM ISM Public

    Forked from z2e2/ISM

    Jupyter Notebook 9 3

  5. Comp_Metagenomics_resources Comp_Metagenomics_resources Public

    Materials for Computational Metagenomics class developed for NSF TUES project

    Jupyter Notebook 8 1

  6. Fizzy Fizzy Public

    Feature selection for biological data formats (Fizzy)

    Python 7 4

Repositories

Showing 10 of 51 repositories
  • Scorpio Public Forked from MsAlEhR/Scorpio

    Scorpio: Advancing Embeddings for Superior Biological Sequence Analysis

    Python 2 GPL-3.0 1 0 0 Updated Apr 1, 2025
  • Incremental-Protein-Search Public Forked from ece303/Incremental-Protein-Search
    Python 1 2 0 0 Updated Feb 18, 2025
  • Genomics-Language-Model-Comparison Public
    Python 0 MIT 0 0 0 Updated Feb 18, 2025
  • Naive_Bayes Public Forked from AlexCristian/Naive_Bayes

    A Naive Bayes classifier for metagenomic data.

    C++ 2 5 0 0 Updated Sep 23, 2024
  • MetaBERTa Public
    Python 2 0 0 0 Updated Jun 30, 2024
  • FDSL_Evo Public

    Repository for code from Streamlining Computational Fragment-Based Drug Discovery through Evolutionary Optimization Informed by Ligand-Based Virtual Prescreening

    Python 1 0 0 0 Updated May 5, 2024
  • bio-course-materials Public Forked from gditzler/bio-course-materials

    Course materials for a bioinformatics course.

    Jupyter Notebook 5 GPL-3.0 4 0 0 Updated Jan 23, 2024
  • Complet-Plus Public Forked from rtn28/Complet-Plus

    Complet-Plus by Rachel Nguyen and Drexel EESI Lab

    Shell 3 2 0 0 Updated Mar 30, 2023
  • covid_severity Public Forked from bahrad/covid_severity

    Predicting COVID-19 Disease Severity from Spike Genotype Based on Global Sequencing Data

    Python 0 1 0 0 Updated May 26, 2022
  • Covid Public Forked from bahrad/Covid

    SARS-CoV-2 Spike Sequence Variant Analysis Using Interpretable Deep Learning

    Jupyter Notebook 0 2 0 0 Updated May 26, 2022
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