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Merged
merged 1 commit into from
Oct 20, 2025
Merged

{2023.06}[2022b,a64fx] apps originally built with EB 4.9.2 #1245

merged 1 commit into from
Oct 20, 2025

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@bedroge
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@bedroge bedroge commented Oct 19, 2025 •
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#1244 was accidentally merged before deploying, and deploying afterwards doesn't work. So we rebuild it here.

@bedroge bedroge added 2023.06-software.eessi.io 2023.06 version of software.eessi.io a64fx labels Oct 19, 2025
@bedroge bedroge mentioned this pull request Oct 19, 2025
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bedroge commented Oct 19, 2025

bot: build repo:eessi.io-2023.06-software instance:eessi-bot-deucalion for:arch=aarch64/a64fx

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eessi-bot-deucalion bot commented Oct 19, 2025 •
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New job on instance eessi-bot-deucalion for repository eessi.io-2023.06-software
Building on: a64fx
Building for: aarch64/a64fx
Job dir: /home/eessibot/new-bot/jobs/2025.10/pr_1245/588989

date job status comment
Oct 19 07:52:37 UTC 2025 submitted job id 588989 awaits release by job manager
Oct 19 07:52:53 UTC 2025 released job awaits launch by Slurm scheduler
Oct 19 07:53:56 UTC 2025 running job 588989 is running
Oct 20 00:05:35 UTC 2025 finished
😁 SUCCESS (click triangle for details)
Details
✅ job output file slurm-588989.out
✅ no message matching FATAL:
✅ no message matching ERROR:
✅ no message matching FAILED:
✅ no message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2023.06-software-linux-aarch64-a64fx-17609178790.tar.gzsize: 942 MiB (988109851 bytes)
entries: 37103
modules under 2023.06/software/linux/aarch64/a64fx/modules/all
BCFtools/1.17-GCC-12.2.0.lua
BLAST+/2.14.0-gompi-2022b.lua
BamTools/2.5.2-GCC-12.2.0.lua
Bio-DB-HTS/3.01-GCC-12.2.0.lua
Bio-SearchIO-hmmer/1.7.3-GCC-12.2.0.lua
BioPerl/1.7.8-GCCcore-12.2.0.lua
Biopython/1.81-foss-2022b.lua
Bowtie2/2.5.1-GCC-12.2.0.lua
CD-HIT/4.8.1-GCC-12.2.0.lua
CGAL/5.5.2-GCCcore-12.2.0.lua
CapnProto/0.10.3-GCCcore-12.2.0.lua
GL2PS/1.4.2-GCCcore-12.2.0.lua
GST-plugins-base/1.22.1-GCC-12.2.0.lua
GStreamer/1.22.1-GCC-12.2.0.lua
GenomeTools/1.6.2-GCC-12.2.0.lua
Graphene/1.10.8-GCCcore-12.2.0.lua
HTSlib/1.17-GCC-12.2.0.lua
ISA-L/2.30.0-GCCcore-12.2.0.lua
KaHIP/3.14-gompi-2022b.lua
KronaTools/2.8.1-GCCcore-12.2.0.lua
LMDB/0.9.29-GCCcore-12.2.0.lua
Lua/5.4.4-GCCcore-12.2.0.lua
MAFFT/7.505-GCC-12.2.0-with-extensions.lua
MDAnalysis/2.4.2-foss-2022b.lua
MPC/1.3.1-GCCcore-12.2.0.lua
Mash/2.3-GCC-12.2.0.lua
MetaEuk/6-GCC-12.2.0.lua
MultiQC/1.14-foss-2022b.lua
Perl/5.36.0-GCCcore-12.2.0-minimal.lua
PyYAML/6.0-GCCcore-12.2.0.lua
Pysam/0.21.0-GCC-12.2.0.lua
ROOT/6.26.10-foss-2022b.lua
SAMtools/1.17-GCC-12.2.0.lua
VCFtools/0.1.16-GCC-12.2.0.lua
WhatsHap/2.1-foss-2022b.lua
XML-LibXML/2.0208-GCCcore-12.2.0.lua
bokeh/3.2.1-foss-2022b.lua
cpio/2.15-GCCcore-12.2.0.lua
dask/2023.7.1-foss-2022b.lua
elfutils/0.189-GCCcore-12.2.0.lua
fastp/0.23.4-GCC-12.2.0.lua
freeglut/3.4.0-GCCcore-12.2.0.lua
gnuplot/5.4.6-GCCcore-12.2.0.lua
h5py/3.8.0-foss-2022b.lua
libcerf/2.3-GCCcore-12.2.0.lua
libgd/2.3.3-GCCcore-12.2.0.lua
lpsolve/5.5.2.11-GCC-12.2.0.lua
meson-python/0.11.0-GCCcore-12.2.0.lua
mpi4py/3.1.4-gompi-2022b.lua
ncbi-vdb/3.0.5-gompi-2022b.lua
netcdf4-python/1.6.3-foss-2022b.lua
networkx/3.0-gfbf-2022b.lua
parallel/20230722-GCCcore-12.2.0.lua
pkgconfig/1.5.5-GCCcore-12.2.0-python.lua
pyfaidx/0.7.2.1-GCCcore-12.2.0.lua
python-isal/1.1.0-GCCcore-12.2.0.lua
setuptools/64.0.3-GCCcore-12.2.0.lua
tqdm/4.64.1-GCCcore-12.2.0.lua
wxWidgets/3.2.2.1-GCC-12.2.0.lua
software under 2023.06/software/linux/aarch64/a64fx/software
BCFtools/1.17-GCC-12.2.0
BLAST+/2.14.0-gompi-2022b
BamTools/2.5.2-GCC-12.2.0
Bio-DB-HTS/3.01-GCC-12.2.0
Bio-SearchIO-hmmer/1.7.3-GCC-12.2.0
BioPerl/1.7.8-GCCcore-12.2.0
Biopython/1.81-foss-2022b
Bowtie2/2.5.1-GCC-12.2.0
CD-HIT/4.8.1-GCC-12.2.0
CGAL/5.5.2-GCCcore-12.2.0
CapnProto/0.10.3-GCCcore-12.2.0
GL2PS/1.4.2-GCCcore-12.2.0
GST-plugins-base/1.22.1-GCC-12.2.0
GStreamer/1.22.1-GCC-12.2.0
GenomeTools/1.6.2-GCC-12.2.0
Graphene/1.10.8-GCCcore-12.2.0
HTSlib/1.17-GCC-12.2.0
ISA-L/2.30.0-GCCcore-12.2.0
KaHIP/3.14-gompi-2022b
KronaTools/2.8.1-GCCcore-12.2.0
LMDB/0.9.29-GCCcore-12.2.0
Lua/5.4.4-GCCcore-12.2.0
MAFFT/7.505-GCC-12.2.0-with-extensions
MDAnalysis/2.4.2-foss-2022b
MPC/1.3.1-GCCcore-12.2.0
Mash/2.3-GCC-12.2.0
MetaEuk/6-GCC-12.2.0
MultiQC/1.14-foss-2022b
Perl/5.36.0-GCCcore-12.2.0-minimal
PyYAML/6.0-GCCcore-12.2.0
Pysam/0.21.0-GCC-12.2.0
ROOT/6.26.10-foss-2022b
SAMtools/1.17-GCC-12.2.0
VCFtools/0.1.16-GCC-12.2.0
WhatsHap/2.1-foss-2022b
XML-LibXML/2.0208-GCCcore-12.2.0
bokeh/3.2.1-foss-2022b
cpio/2.15-GCCcore-12.2.0
dask/2023.7.1-foss-2022b
elfutils/0.189-GCCcore-12.2.0
fastp/0.23.4-GCC-12.2.0
freeglut/3.4.0-GCCcore-12.2.0
gnuplot/5.4.6-GCCcore-12.2.0
h5py/3.8.0-foss-2022b
libcerf/2.3-GCCcore-12.2.0
libgd/2.3.3-GCCcore-12.2.0
lpsolve/5.5.2.11-GCC-12.2.0
meson-python/0.11.0-GCCcore-12.2.0
mpi4py/3.1.4-gompi-2022b
ncbi-vdb/3.0.5-gompi-2022b
netcdf4-python/1.6.3-foss-2022b
networkx/3.0-gfbf-2022b
parallel/20230722-GCCcore-12.2.0
pkgconfig/1.5.5-GCCcore-12.2.0-python
pyfaidx/0.7.2.1-GCCcore-12.2.0
python-isal/1.1.0-GCCcore-12.2.0
setuptools/64.0.3-GCCcore-12.2.0
tqdm/4.64.1-GCCcore-12.2.0
wxWidgets/3.2.2.1-GCC-12.2.0
reprod directories under 2023.06/software/linux/aarch64/a64fx/reprod
no reprod directories in tarball
other under 2023.06/software/linux/aarch64/a64fx
no other files in tarball
Oct 20 00:05:35 UTC 2025 test result
😁 SUCCESS (click triangle for details)
ReFrame Summary
[ SKIP ] ( 1/10) Skipping test: nodes in this partition only have 30720 MiB memory available (per node) accodring to the current ReFrame configuration, but 49152 MiB is needed
[ SKIP ] ( 2/10) Skipping test: nodes in this partition only have 30720 MiB memory available (per node) accodring to the current ReFrame configuration, but 49152 MiB is needed
[ SKIP ] ( 3/10) Skipping test: nodes in this partition only have 30720 MiB memory available (per node) accodring to the current ReFrame configuration, but 49152 MiB is needed
[ SKIP ] ( 4/10) Skipping test: nodes in this partition only have 30720 MiB memory available (per node) accodring to the current ReFrame configuration, but 49152 MiB is needed
[ OK ] ( 5/10) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node /15cad6c4 @BotBuildTests:aarch64_a64fx+default
P: latency: 1.69 us (r:0, l:None, u:None)
[ OK ] ( 6/10) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node /6672deda @BotBuildTests:aarch64_a64fx+default
P: latency: 1.69 us (r:0, l:None, u:None)
[ OK ] ( 7/10) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node /2a9a47b1 @BotBuildTests:aarch64_a64fx+default
P: bandwidth: 8321.18 MB/s (r:0, l:None, u:None)
[ OK ] ( 8/10) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node /1b24ab8e @BotBuildTests:aarch64_a64fx+default
P: bandwidth: 8740.44 MB/s (r:0, l:None, u:None)
[ OK ] ( 9/10) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/29Aug2024-foss-2023b-kokkos %scale=1_node /aeb2d9df @BotBuildTests:aarch64_a64fx+default
P: perf: 12.499 timesteps/s (r:0, l:None, u:None)
[ OK ] (10/10) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/2Aug2023_update2-foss-2023a-kokkos %scale=1_node /04ff9ece @BotBuildTests:aarch64_a64fx+default
P: perf: 28.671 timesteps/s (r:0, l:None, u:None)
[ PASSED ] Ran 6/10 test case(s) from 10 check(s) (0 failure(s), 4 skipped, 0 aborted)
Details
✅ job output file slurm-588989.out
✅ no message matching ERROR:
✅ no message matching [\s*FAILED\s*].*Ran .* test case
Oct 20 05:54:41 UTC 2025 uploaded transfer of eessi-2023.06-software-linux-aarch64-a64fx-17609178790.tar.gz to S3 bucket succeeded

@bedroge bedroge changed the title {2023.06}[2023a,a64fx] add remaining apps for EB 4.9.4 easystack {2023.06}[2022b,a64fx] apps originally built with EB 4.9.2 Oct 19, 2025
@trz42
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trz42 commented Oct 19, 2025

Something seems wrong with the first build job... retrying it
bot: build repo:eessi.io-2023.06-software instance:eessi-bot-deucalion for:arch=aarch64/a64fx

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eessi-bot-deucalion bot commented Oct 19, 2025 •
edited by trz42
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New job on instance eessi-bot-deucalion for repository eessi.io-2023.06-software
Building on: a64fx
Building for: aarch64/a64fx
Job dir: /home/eessibot/new-bot/jobs/2025.10/pr_1245/589280

date job status comment
Oct 19 21:03:41 UTC 2025 submitted job id 589280 awaits release by job manager
Oct 19 21:04:15 UTC 2025 released job awaits launch by Slurm scheduler
Oct 19 21:05:18 UTC 2025 running job 589280 is running
Oct 19 21:49:14 UTC 2025 finished
🤷 UNKNOWN (click triangle for detailed information)
  • Job results file _bot_job589280.result does not exist in job directory, or parsing it failed.
  • No artefacts were found/reported.
Oct 19 21:49:14 UTC 2025 test result
🤷 UNKNOWN (click triangle for detailed information)
  • Job test file _bot_job589280.test does not exist in job directory, or parsing it failed.

The other job made progress, so canceled this one.

@trz42 trz42 added the bot:deploy Ask bot to deploy missing software installations to EESSI label Oct 20, 2025
@boegel boegel merged commit 15fba20 into EESSI:main Oct 20, 2025
50 checks passed
@bedroge bedroge deleted the a64fx_eb492_2022b_2 branch October 20, 2025 06:52
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@bedroge @trz42 @boegel