v1.5.0

If you upgrade from previous version then please upgrade autouri too.

$ pip install autouri --upgrade
$ pip install caper --upgrade

Upgraded Cromwell from 52 to 59. Metadata DB is compatible between two versions.

Please check your Caper configuration file at ~/.caper/default.conf to remove cromwell and womtool from the file. Then Caper will automatically download Cromwell/Womtool 59 and use them.

# remove these two lines
cromwell=~/.caper/cromwell_jar/cromwell-52.jar
womtool=~/.caper/womtool_jar/womtool-52.jar

Fixed a bug that takes too long to recursively localize big files from S3 to GCS

• md5 checksum skipping flag was not propagated for recursive localization (in JSON, CSV, TSV) in autouri
• Fixed in autouri

If you get the following error, then check your service account's settings this document.

400 Bad Request
POST https://lifesciences.googleapis.com/v2beta/projects/XXX/locations/us-central1/operations/XXX:cancel
{
  "code" : 400,
  "errors" : [ {
    "domain" : "global",
    "message" : "Precondition check failed.",
    "reason" : "failedPrecondition"
  } ],
  "message" : "Precondition check failed.",
  "status" : "FAILED_PRECONDITION"
}