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1. dcifer dcifer Public

   Distance for Complex Infections: Fast Estimation of Relatedness (R package)

   R 5 4

2. moire moire Public

   MOI and Allele Frequency Recovery from Noisy Polyallelic Genetics Data

   C++ 7 3

3. flexfit flexfit Public

   Flexible format standard curve fitting and data processing (R package)

   R 1

4. liinc-Ab-dynamics liinc-Ab-dynamics Public

   Source code and data for 'SARS-CoV-2 antibody magnitude and detectability are driven by disease severity, timing, and assay'

   R

5. THEREALMcCOIL THEREALMcCOIL Public

   A Markov chain Monte Carlo method that estimates complexity of infection and population allele frequencies using SNP data obtained from Sequenom or similar types of SNP assays.

   C 5 7

6. scale-it-2 scale-it-2 Public

   R 2