Updates for latest tlm_adjoint #11
Workflow file for this run
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name: test-fenics_ice | |
on: | |
push: | |
branches: | |
- main | |
pull_request: | |
branches: | |
- main | |
concurrency: | |
group: ${{ github.workflow }}-${{ github.event.pull_request.number || github.ref }} | |
cancel-in-progress: true | |
jobs: | |
test: | |
runs-on: ubuntu-24.04 | |
timeout-minutes: 60 | |
env: | |
OMP_NUM_THREADS: 1 | |
OPENBLAS_NUM_THREADS: 1 | |
steps: | |
- name: Checkout fenics_ice | |
uses: actions/checkout@v4 | |
with: | |
path: 'fenics_ice' | |
- name: Checkout tlm_adjoint | |
uses: actions/checkout@v4 | |
with: | |
repository: 'tlm-adjoint/tlm_adjoint' | |
path: 'tlm_adjoint' | |
- name: Install dependencies | |
run: | | |
sudo apt-get update | |
sudo apt-get install python3-dolfin python3-git python3-h5py \ | |
python3-matplotlib python3-netcdf4 python3-numpy python3-pytest \ | |
python3-pytest-dependency python3-pytest-mpi \ | |
python3-pytest-order python3-pytest-timeout python3-scipy \ | |
python3-sympy | |
- name: Run tests | |
run: | | |
export PYTHONPATH=$PYTHONPATH:$GITHUB_WORKSPACE/tlm_adjoint | |
cd fenics_ice | |
pytest -v --order-scope=module --timeout=300 --timeout-method=thread | |
pytest -v -k tv --order-scope=module --timeout=300 --timeout-method=thread | |
mpirun -n 2 pytest -v --order-scope=module --timeout=300 --timeout-method=thread | |
mpirun -n 2 pytest -m key --key=smith --timeout=300 --timeout-method=thread |