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modified dust test
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ens-ftricomi committed Sep 6, 2023
1 parent d3d523c commit d71a140
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions tests/test_dust.py
Original file line number Diff line number Diff line change
Expand Up @@ -3,7 +3,7 @@
import shutil
from pathlib import Path
from unittest.mock import patch
from src.python.ensembl.tools.anno.repeat_annotation.dust import run_dust # Replace 'your_module' with the actual module path
from src.python.ensembl.tools.anno.repeat_annotation.dust import run_dust

class TestDust(unittest.TestCase):

Expand All @@ -19,7 +19,7 @@ def test_run_dust(self):
# Define test input values
genome_file = "path/to/your/genome.fasta"
output_dir = self.temp_dir
dust_bin = "dust"
dust_bin = "dustmasker"
num_threads = 2 # Set the number of threads for testing

# Mock any external dependencies or subprocess calls
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