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Automated commits from Noctua #24

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Nov 20, 2023
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Automated commits from Noctua #24

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71 changes: 39 additions & 32 deletions models/AOP_10.ttl
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114 changes: 65 additions & 49 deletions models/AOP_12.ttl
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109 changes: 59 additions & 50 deletions models/AOP_13.ttl
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70 changes: 46 additions & 24 deletions models/AOP_131.ttl
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Original file line number Diff line number Diff line change
Expand Up @@ -19,21 +19,24 @@

<http://purl.obolibrary.org/obo/GO_0003824> a <http://www.w3.org/2002/07/owl#Class> .

<http://purl.obolibrary.org/obo/RO_0003303> a <http://www.w3.org/2002/07/owl#ObjectProperty> .

<http://www.co-ode.org/ontologies/ont.owl#catalytic%20activity> <http://purl.obolibrary.org/obo/RO_0002332> <http://www.co-ode.org/ontologies/ont.owl#porphyrins> ;
<http://geneontology.org/lego/hint/layout/x> "454.75"^^<http://www.w3.org/2001/XMLSchema#string> ;
<http://geneontology.org/lego/hint/layout/y> "695.5"^^<http://www.w3.org/2001/XMLSchema#string> ;
a <http://www.w3.org/2002/07/owl#NamedIndividual> , <http://purl.obolibrary.org/obo/GO_0003824> ;
<http://purl.org/dc/elements/1.1/contributor> "https://orcid.org/0000-0001-9356-3475"^^<http://www.w3.org/2001/XMLSchema#string> ;
<http://purl.org/dc/elements/1.1/date> "2023-09-26"^^<http://www.w3.org/2001/XMLSchema#string> .
<http://purl.org/dc/elements/1.1/date> "2023-11-15"^^<http://www.w3.org/2001/XMLSchema#string> .

<http://purl.obolibrary.org/obo/GO_0010467> a <http://www.w3.org/2002/07/owl#Class> .

<http://www.co-ode.org/ontologies/ont.owl#gene%20expression> <http://purl.obolibrary.org/obo/RO_0002428> <http://www.co-ode.org/ontologies/ont.owl#uroporphyrinogen> ;
<http://geneontology.org/lego/hint/layout/x> "468.75"^^<http://www.w3.org/2001/XMLSchema#string> ;
<http://geneontology.org/lego/hint/layout/y> "1300"^^<http://www.w3.org/2001/XMLSchema#string> ;
<http://www.co-ode.org/ontologies/ont.owl#gene%20expression> <http://purl.obolibrary.org/obo/RO_0002234> <http://www.co-ode.org/ontologies/ont.owl#cytochrome%20P450%201A2> , <http://www.co-ode.org/ontologies/ont.owl#cytochrome%20P450%201A5%20%28chicken%29> ;
<http://purl.obolibrary.org/obo/RO_0002332> <http://www.co-ode.org/ontologies/ont.owl#uroporphyrinogen> ;
<http://geneontology.org/lego/hint/layout/x> "467.75"^^<http://www.w3.org/2001/XMLSchema#string> ;
<http://geneontology.org/lego/hint/layout/y> "1229"^^<http://www.w3.org/2001/XMLSchema#string> ;
a <http://www.w3.org/2002/07/owl#NamedIndividual> , <http://purl.obolibrary.org/obo/GO_0010467> ;
<http://purl.org/dc/elements/1.1/contributor> "https://orcid.org/0000-0001-9356-3475"^^<http://www.w3.org/2001/XMLSchema#string> ;
<http://purl.org/dc/elements/1.1/date> "2023-09-26"^^<http://www.w3.org/2001/XMLSchema#string> .
<http://purl.org/dc/elements/1.1/date> "2023-11-15"^^<http://www.w3.org/2001/XMLSchema#string> .

<http://purl.obolibrary.org/obo/RO_0000057> a <http://www.w3.org/2002/07/owl#ObjectProperty> .

Expand All @@ -52,14 +55,14 @@
<http://geneontology.org/lego/hint/layout/y> "1513.5"^^<http://www.w3.org/2001/XMLSchema#string> ;
a <http://www.w3.org/2002/07/owl#NamedIndividual> , <http://purl.obolibrary.org/obo/PR_000003858> ;
<http://purl.org/dc/elements/1.1/contributor> "https://orcid.org/0000-0001-9356-3475"^^<http://www.w3.org/2001/XMLSchema#string> ;
<http://purl.org/dc/elements/1.1/date> "2023-09-26"^^<http://www.w3.org/2001/XMLSchema#string> .
<http://purl.org/dc/elements/1.1/date> "2023-11-15"^^<http://www.w3.org/2001/XMLSchema#string> .

<http://www.co-ode.org/ontologies/ont.owl#aryl%20hydrocarbon%20receptor%20activity> <http://geneontology.org/lego/hint/layout/x> "464"^^<http://www.w3.org/2001/XMLSchema#string> ;
<http://geneontology.org/lego/hint/layout/y> "1506.25"^^<http://www.w3.org/2001/XMLSchema#string> ;
<http://purl.obolibrary.org/obo/RO_0002213> <http://www.co-ode.org/ontologies/ont.owl#gene%20expression> ;
a <http://www.w3.org/2002/07/owl#NamedIndividual> , <http://purl.obolibrary.org/obo/GO_0004874> ;
<http://purl.org/dc/elements/1.1/contributor> "https://orcid.org/0000-0001-9356-3475"^^<http://www.w3.org/2001/XMLSchema#string> ;
<http://purl.org/dc/elements/1.1/date> "2023-09-26"^^<http://www.w3.org/2001/XMLSchema#string> .
<http://purl.org/dc/elements/1.1/date> "2023-11-15"^^<http://www.w3.org/2001/XMLSchema#string> .

<http://purl.obolibrary.org/obo/CHEBI_26214> a <http://www.w3.org/2002/07/owl#Class> .

Expand All @@ -73,15 +76,13 @@

<http://purl.obolibrary.org/obo/PR_P79761> a <http://www.w3.org/2002/07/owl#Class> .

<http://www.co-ode.org/ontologies/ont.owl#cytochrome%20P450%201A2> <http://purl.obolibrary.org/obo/RO_0002327> <http://www.co-ode.org/ontologies/ont.owl#gene%20expression> ;
<http://geneontology.org/lego/hint/layout/x> "143.75"^^<http://www.w3.org/2001/XMLSchema#string> ;
<http://www.co-ode.org/ontologies/ont.owl#cytochrome%20P450%201A2> <http://geneontology.org/lego/hint/layout/x> "143.75"^^<http://www.w3.org/2001/XMLSchema#string> ;
<http://geneontology.org/lego/hint/layout/y> "1295.25"^^<http://www.w3.org/2001/XMLSchema#string> ;
a <http://www.w3.org/2002/07/owl#NamedIndividual> , <http://purl.obolibrary.org/obo/PR_000006102> ;
<http://purl.org/dc/elements/1.1/contributor> "https://orcid.org/0000-0001-9356-3475"^^<http://www.w3.org/2001/XMLSchema#string> ;
<http://purl.org/dc/elements/1.1/date> "2023-09-26"^^<http://www.w3.org/2001/XMLSchema#string> .

<http://www.co-ode.org/ontologies/ont.owl#cytochrome%20P450%201A5%20%28chicken%29> <http://purl.obolibrary.org/obo/RO_0002327> <http://www.co-ode.org/ontologies/ont.owl#gene%20expression> ;
<http://geneontology.org/lego/hint/layout/x> "832.5"^^<http://www.w3.org/2001/XMLSchema#string> ;
<http://www.co-ode.org/ontologies/ont.owl#cytochrome%20P450%201A5%20%28chicken%29> <http://geneontology.org/lego/hint/layout/x> "832.5"^^<http://www.w3.org/2001/XMLSchema#string> ;
<http://geneontology.org/lego/hint/layout/y> "1289.25"^^<http://www.w3.org/2001/XMLSchema#string> ;
a <http://www.w3.org/2002/07/owl#NamedIndividual> , <http://purl.obolibrary.org/obo/PR_P79761> ;
<http://purl.org/dc/elements/1.1/contributor> "https://orcid.org/0000-0001-9356-3475"^^<http://www.w3.org/2001/XMLSchema#string> ;
Expand All @@ -91,34 +92,34 @@
<http://geneontology.org/lego/hint/layout/y> "197"^^<http://www.w3.org/2001/XMLSchema#string> ;
a <http://www.w3.org/2002/07/owl#NamedIndividual> , <http://purl.obolibrary.org/obo/MP_0005654> ;
<http://purl.org/dc/elements/1.1/contributor> "https://orcid.org/0000-0001-9356-3475"^^<http://www.w3.org/2001/XMLSchema#string> ;
<http://purl.org/dc/elements/1.1/date> "2023-09-26"^^<http://www.w3.org/2001/XMLSchema#string> .
<http://purl.org/dc/elements/1.1/date> "2023-11-15"^^<http://www.w3.org/2001/XMLSchema#string> .

<http://www.co-ode.org/ontologies/ont.owl#porphyrins> <http://purl.obolibrary.org/obo/RO_0002610> <http://www.co-ode.org/ontologies/ont.owl#porphyria> ;
<http://www.co-ode.org/ontologies/ont.owl#porphyrins> <http://purl.obolibrary.org/obo/RO_0003303> <http://www.co-ode.org/ontologies/ont.owl#porphyria> ;
<http://geneontology.org/lego/hint/layout/x> "468.75"^^<http://www.w3.org/2001/XMLSchema#string> ;
<http://geneontology.org/lego/hint/layout/y> "416.25"^^<http://www.w3.org/2001/XMLSchema#string> ;
a <http://www.w3.org/2002/07/owl#NamedIndividual> , <http://purl.obolibrary.org/obo/CHEBI_26214> ;
<http://purl.org/dc/elements/1.1/contributor> "https://orcid.org/0000-0001-9356-3475"^^<http://www.w3.org/2001/XMLSchema#string> ;
<http://purl.org/dc/elements/1.1/date> "2023-09-26"^^<http://www.w3.org/2001/XMLSchema#string> .
<http://purl.org/dc/elements/1.1/date> "2023-11-15"^^<http://www.w3.org/2001/XMLSchema#string> .

<http://www.co-ode.org/ontologies/ont.owl#uroporphyrinogen> <http://geneontology.org/lego/hint/layout/x> "453.8833312988281"^^<http://www.w3.org/2001/XMLSchema#string> ;
<http://www.co-ode.org/ontologies/ont.owl#uroporphyrinogen> <http://geneontology.org/lego/hint/layout/x> "452.88330078125"^^<http://www.w3.org/2001/XMLSchema#string> ;
<http://geneontology.org/lego/hint/layout/y> "996.75"^^<http://www.w3.org/2001/XMLSchema#string> ;
<http://purl.obolibrary.org/obo/RO_0002212> <http://www.co-ode.org/ontologies/ont.owl#catalytic%20activity> ;
a <http://www.w3.org/2002/07/owl#NamedIndividual> , <http://purl.obolibrary.org/obo/CHEBI_27258> ;
<http://purl.org/dc/elements/1.1/contributor> "https://orcid.org/0000-0001-9356-3475"^^<http://www.w3.org/2001/XMLSchema#string> ;
<http://purl.org/dc/elements/1.1/date> "2023-09-26"^^<http://www.w3.org/2001/XMLSchema#string> .
<http://purl.org/dc/elements/1.1/date> "2023-11-15"^^<http://www.w3.org/2001/XMLSchema#string> .

<http://www.co-ode.org/ontologies/ont.owl#uroporphyrinogen%20decarboxylase> <http://purl.obolibrary.org/obo/RO_0002327> <http://www.co-ode.org/ontologies/ont.owl#catalytic%20activity> ;
<http://geneontology.org/lego/hint/layout/x> "831.63330078125"^^<http://www.w3.org/2001/XMLSchema#string> ;
<http://geneontology.org/lego/hint/layout/y> "682.75"^^<http://www.w3.org/2001/XMLSchema#string> ;
a <http://www.w3.org/2002/07/owl#NamedIndividual> , <http://purl.obolibrary.org/obo/PR_000017134> ;
<http://purl.org/dc/elements/1.1/contributor> "https://orcid.org/0000-0001-9356-3475"^^<http://www.w3.org/2001/XMLSchema#string> ;
<http://purl.org/dc/elements/1.1/date> "2023-09-26"^^<http://www.w3.org/2001/XMLSchema#string> .
<http://purl.org/dc/elements/1.1/date> "2023-11-15"^^<http://www.w3.org/2001/XMLSchema#string> .

<https://noctua.apps.renci.org/model/AOP_131> <http://geneontology.org/lego/modelstate> "review"^^<http://www.w3.org/2001/XMLSchema#string> ;
<https://noctua.apps.renci.org/model/AOP_131> <http://geneontology.org/lego/modelstate> "production"^^<http://www.w3.org/2001/XMLSchema#string> ;
a <http://www.w3.org/2002/07/owl#Ontology> ;
<http://purl.org/dc/elements/1.1/title> "Aryl hydrocarbon receptor activation leading to uroporphyria"^^<http://www.w3.org/2001/XMLSchema#string> ;
<http://purl.org/dc/elements/1.1/contributor> "https://orcid.org/0000-0001-9356-3475"^^<http://www.w3.org/2001/XMLSchema#string> ;
<http://purl.org/dc/elements/1.1/date> "2023-09-26"^^<http://www.w3.org/2001/XMLSchema#string> .
<http://purl.org/dc/elements/1.1/date> "2023-11-15"^^<http://www.w3.org/2001/XMLSchema#string> .

<http://geneontology.org/lego/hint/layout/x> a <http://www.w3.org/2002/07/owl#AnnotationProperty> .

Expand All @@ -134,30 +135,51 @@

<http://purl.org/dc/elements/1.1/date> a <http://www.w3.org/2002/07/owl#AnnotationProperty> .

_:t3185 <http://www.w3.org/2002/07/owl#annotatedProperty> <http://purl.obolibrary.org/obo/RO_0002212> ;
_:t5079 <http://www.w3.org/2002/07/owl#annotatedProperty> <http://purl.obolibrary.org/obo/RO_0003303> ;
<http://www.w3.org/2002/07/owl#annotatedSource> <http://www.co-ode.org/ontologies/ont.owl#porphyrins> ;
<http://www.w3.org/2002/07/owl#annotatedTarget> <http://www.co-ode.org/ontologies/ont.owl#porphyria> ;
a <http://www.w3.org/2002/07/owl#Axiom> ;
<http://purl.org/dc/elements/1.1/contributor> "https://orcid.org/0000-0001-9356-3475"^^<http://www.w3.org/2001/XMLSchema#string> ;
<http://purl.org/dc/elements/1.1/date> "2023-11-08"^^<http://www.w3.org/2001/XMLSchema#string> .

_:t5080 <http://www.w3.org/2002/07/owl#annotatedProperty> <http://purl.obolibrary.org/obo/RO_0002212> ;
<http://www.w3.org/2002/07/owl#annotatedSource> <http://www.co-ode.org/ontologies/ont.owl#uroporphyrinogen> ;
<http://www.w3.org/2002/07/owl#annotatedTarget> <http://www.co-ode.org/ontologies/ont.owl#catalytic%20activity> ;
a <http://www.w3.org/2002/07/owl#Axiom> ;
<http://purl.org/dc/elements/1.1/contributor> "https://orcid.org/0000-0001-9356-3475"^^<http://www.w3.org/2001/XMLSchema#string> ;
<http://purl.org/dc/elements/1.1/date> "2023-09-12"^^<http://www.w3.org/2001/XMLSchema#string> .

_:t3186 <http://www.w3.org/2002/07/owl#annotatedProperty> <http://purl.obolibrary.org/obo/RO_0002327> ;
_:t5081 <http://www.w3.org/2002/07/owl#annotatedProperty> <http://purl.obolibrary.org/obo/RO_0002327> ;
<http://www.w3.org/2002/07/owl#annotatedSource> <http://www.co-ode.org/ontologies/ont.owl#aryl%20hydrocarbon%20receptor> ;
<http://www.w3.org/2002/07/owl#annotatedTarget> <http://www.co-ode.org/ontologies/ont.owl#aryl%20hydrocarbon%20receptor%20activity> ;
a <http://www.w3.org/2002/07/owl#Axiom> ;
<http://purl.org/dc/elements/1.1/contributor> "https://orcid.org/0000-0001-9356-3475"^^<http://www.w3.org/2001/XMLSchema#string> ;
<http://purl.org/dc/elements/1.1/date> "2023-09-12"^^<http://www.w3.org/2001/XMLSchema#string> .

_:t3187 <http://www.w3.org/2002/07/owl#annotatedProperty> <http://purl.obolibrary.org/obo/RO_0002213> ;
_:t5082 <http://www.w3.org/2002/07/owl#annotatedProperty> <http://purl.obolibrary.org/obo/RO_0002213> ;
<http://www.w3.org/2002/07/owl#annotatedSource> <http://www.co-ode.org/ontologies/ont.owl#aryl%20hydrocarbon%20receptor%20activity> ;
<http://www.w3.org/2002/07/owl#annotatedTarget> <http://www.co-ode.org/ontologies/ont.owl#gene%20expression> ;
a <http://www.w3.org/2002/07/owl#Axiom> ;
<http://purl.org/dc/elements/1.1/contributor> "https://orcid.org/0000-0001-9356-3475"^^<http://www.w3.org/2001/XMLSchema#string> ;
<http://purl.org/dc/elements/1.1/date> "2023-09-15"^^<http://www.w3.org/2001/XMLSchema#string> .

_:t3188 <http://www.w3.org/2002/07/owl#annotatedProperty> <http://purl.obolibrary.org/obo/RO_0002428> ;
_:t5083 <http://www.w3.org/2002/07/owl#annotatedProperty> <http://purl.obolibrary.org/obo/RO_0002234> ;
<http://www.w3.org/2002/07/owl#annotatedSource> <http://www.co-ode.org/ontologies/ont.owl#gene%20expression> ;
<http://www.w3.org/2002/07/owl#annotatedTarget> <http://www.co-ode.org/ontologies/ont.owl#cytochrome%20P450%201A2> ;
a <http://www.w3.org/2002/07/owl#Axiom> ;
<http://purl.org/dc/elements/1.1/contributor> "https://orcid.org/0000-0001-9356-3475"^^<http://www.w3.org/2001/XMLSchema#string> ;
<http://purl.org/dc/elements/1.1/date> "2023-11-08"^^<http://www.w3.org/2001/XMLSchema#string> .

_:t5084 <http://www.w3.org/2002/07/owl#annotatedProperty> <http://purl.obolibrary.org/obo/RO_0002234> ;
<http://www.w3.org/2002/07/owl#annotatedSource> <http://www.co-ode.org/ontologies/ont.owl#gene%20expression> ;
<http://www.w3.org/2002/07/owl#annotatedTarget> <http://www.co-ode.org/ontologies/ont.owl#cytochrome%20P450%201A5%20%28chicken%29> ;
a <http://www.w3.org/2002/07/owl#Axiom> ;
<http://purl.org/dc/elements/1.1/contributor> "https://orcid.org/0000-0001-9356-3475"^^<http://www.w3.org/2001/XMLSchema#string> ;
<http://purl.org/dc/elements/1.1/date> "2023-11-08"^^<http://www.w3.org/2001/XMLSchema#string> .

_:t5085 <http://www.w3.org/2002/07/owl#annotatedProperty> <http://purl.obolibrary.org/obo/RO_0002332> ;
<http://www.w3.org/2002/07/owl#annotatedSource> <http://www.co-ode.org/ontologies/ont.owl#gene%20expression> ;
<http://www.w3.org/2002/07/owl#annotatedTarget> <http://www.co-ode.org/ontologies/ont.owl#uroporphyrinogen> ;
a <http://www.w3.org/2002/07/owl#Axiom> ;
<http://purl.org/dc/elements/1.1/contributor> "https://orcid.org/0000-0001-9356-3475"^^<http://www.w3.org/2001/XMLSchema#string> ;
<http://purl.org/dc/elements/1.1/date> "2023-09-12"^^<http://www.w3.org/2001/XMLSchema#string> .
<http://purl.org/dc/elements/1.1/date> "2023-11-08"^^<http://www.w3.org/2001/XMLSchema#string> .
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