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@FGA-DIKU

Fine Grained Analysis (DIKU)

README.md

FGA-DIKU

A GitHub organization of the Fine Grained Analysis Collaboratory at the Pioneer Centre for AI.

Our website can be found here but is currently under construction.

Repositories

Active

AMAES

Munk, A., Ambsdorf, J. & Llambias, S.

CODE: https://github.com/asbjrnmunk/amaes
PAPER: https://arxiv.org/abs/2408.00640v2

EHR (CORE-BEHRT)

Odgaard, M., Klein, K., Montgomery, M., Sobhaninia, Z. & Lorenzen, S.

CODE: https://github.com/FGA-DIKU/EHR
PAPER: https://arxiv.org/abs/2404.15201

MRI-Augmentation

Ghazi, M.

CODE: https://github.com/Mostafa-Ghazi/MRI-Augmentation

Yucca

Llambias, S.

CODE: https://github.com/Sllambias/yucca
PAPER: https://arxiv.org/abs/2407.19888

Archived

Diamant, Magnus & Pedersen, William. Master's Thesis, 2023: Automatic Quality Assessment and Pathology Detection of Magnetic Resonance Imaging

Private repository. Access is available upon request.

Kozlová, Nicole. Master's Thesis, 2023: FLAIR-T1 Image Registration

Private repository. Access is available upon request.

Montgomery, Maria. Master's Thesis, 2024: Prediction of Breast Cancer Risk using Transformer Model

Private repository. Access is available upon request.

Ferrer, Neus. Master's Thesis, 2022: Cerebral Microbleed detection and segmentation for COVID-19 brain MR images.

Private repository. Access is available upon request.

Wu, Ji. Master's Thesis, 2023: Active Learning using a 3D UXNet in Hippocampus segmentation.

Private repository. Access is available upon request.

Popular repositories Loading

  1. EHR EHR Public

    A BERT-based framework for processing and analyzing Electronic Health Records (EHR) data. It provides an end-to-end pipeline for data preprocessing, model training, and clinical outcome prediction.

    Python 6 3

  2. .github .github Public

    FGA-DIKU/.github is a ✨special ✨ repository used to add a README.md to the organization profile, visible to anyone.

  3. fga-diku.github.io fga-diku.github.io Public

    Forked from BelongieLab/belongielab.github.io

    Website

    SCSS

  4. Information Information Public

  5. ehr2meds ehr2meds Public

    Scripts for transforming raw EHR data into the structured MEDS format

    Python

Repositories

Showing 5 of 5 repositories
  • EHR Public

    A BERT-based framework for processing and analyzing Electronic Health Records (EHR) data. It provides an end-to-end pipeline for data preprocessing, model training, and clinical outcome prediction.

    FGA-DIKU/EHR’s past year of commit activity
    Python 6 MIT 3 68 2 Updated Apr 1, 2025
  • ehr2meds Public

    Scripts for transforming raw EHR data into the structured MEDS format

    FGA-DIKU/ehr2meds’s past year of commit activity
    Python 0 MIT 0 4 0 Updated Mar 27, 2025
  • .github Public

    FGA-DIKU/.github is a ✨special ✨ repository used to add a README.md to the organization profile, visible to anyone.

    FGA-DIKU/.github’s past year of commit activity
    0 0 0 0 Updated Mar 17, 2025
  • fga-diku.github.io Public Forked from BelongieLab/belongielab.github.io

    Website

    FGA-DIKU/fga-diku.github.io’s past year of commit activity
    SCSS 0 MIT 32 0 0 Updated Sep 16, 2024
  • Information Public
    FGA-DIKU/Information’s past year of commit activity
    0 0 0 0 Updated May 10, 2024

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