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2.4.2 ChRIS FS DS DS plugin worflow summary [moc]

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Jorge edited this page May 13, 2021 · 6 revisions

ChRIS FS DS DS plugin worflow summary [moc]

Abstract

This page provides summary instructions for directly interacting with the CUBE backend to create the following Feed workflow:

⬤:N     N -- Indicates the instance id of the plugin
F|DS(K)  K -- Indicates plugin id

      ⬤:1        
      |                  
      |           FS(18): pl-mri10yr06mo01da_normal_moc
      ↓
      ⬤:2        DS(16): pl-freesurfer_pp_moc
     ╱│╲
    ╱ │ ╲
   ╱  │  ╲
  ╱   │   ╲
 ╱    │    ╲
↓     ↓     ↓ 
⬤:3  ⬤:4  ⬤:5  DS(15): pl-mpcs_moc
│     │     │   
↓     ↓     ↓
⬤:6  ⬤:7  ⬤:8  DS(17): pl-z2labelmap_moc


#**************
# MOC         *
#**************
oc login https://k-openshift.osh.massopen.cloud:8443 --token=MgakU9ennshIShEiVrvAskkQKVo41A9BvsITUZb68J4
oc get pods
oc logs --follow pfioh-XXXXX
oc logs --follow pman-XXXX
deljobs chris-jid-XXXX
oc logs --follow chris-jid-Y-XXX -c chris-jid-Y
oc get pvc
#**************

docker run -v $(pwd)/app:/app -p 8888:8888 jupyter/scipy-notebook  
*destroy* ; sudo rm -fr CHRIS_REMOTE_FS; rm -fr CHRIS_REMOTE_FS; *make* -U -I -s -d -i local


export HOST_IP=$(ip route | grep -v docker | awk '{if(NF==11) print $9}' | head -n 1)
export HOST_PORT=8000

pfurl --verb POST --raw --http ${HOST_IP}:5005/api/v1/cmd   \
        --httpResponseBodyParse --jsonwrapper 'payload' --msg \
'{  "action": "hello",
    "meta": {
                "askAbout":     "sysinfo",
                "echoBack":      "Hi there!",
                "service":       "host"
            }
}' --quiet | underscore print --color

# RUN FS plugin BEFORE SETTING PROXY!!!
#######################################################################
# RUN FS plugin (plid:14) `pl-10yr06mo01da_normal` on host as (jid 0) #
#######################################################################

      ⬤:1        

pfurl --auth chris:chris1234 --verb GET                           \
      --http ${HOST_IP}:${HOST_PORT}/api/v1/plugins/14/           \
      --content-type application/vnd.collection+json  --quiet     \
      --jsonpprintindent 4 | underscore print --color 

pfurl --auth chris:chris1234 --verb POST                          \
      --http ${HOST_IP}:${HOST_PORT}/api/v1/plugins/14/instances/ \
      --content-type application/vnd.collection+json              \
      --jsonwrapper 'template' --msg '
{"data":
    [{"name":"dir",
      "value":"/usr/src/data"}
    ]
}' --quiet | underscore print --color

pfurl --auth chris:chris1234                                       \
      --verb GET                                                   \
      --http ${HOST_IP}:${HOST_PORT}/api/v1/plugins/instances/1/   \
      --content-type application/vnd.collection+json --quiet       \
      --jsonpprintindent 4 | underscore print --color


#######################################################################
# Now set MOC and Proxy                                               #
#######################################################################

pfurl --verb POST --raw \
      --http ${HOST_IP}:5005/api/v1/cmd \
      --httpResponseBodyParse \
      --jsonwrapper 'payload' \
      --msg \
'{  "action": "internalctl",
    "meta": {
                "var":     "/service/moc",
                "set":     {
                    "compute": {
                        "addr": "pman-radiology.k-apps.osh.massopen.cloud",
                        "baseURLpath": "api/v1/cmd/",
                        "status": "undefined",
                        "authToken": "{Bu7H)FyWp{,e<"
                    },
                    "data": {
                        "addr": "pfioh-radiology.k-apps.osh.massopen.cloud",
                        "baseURLpath": "api/v1/cmd/",
                        "status": "undefined",
                        "authToken": "{Bu7H)FyWp{,e<",
                        "serviceMan": "openshift"
                    }
                }
            }
}' --quiet | underscore print --color

pfurl --verb POST --raw \
      --http ${HOST_IP}:5005/api/v1/cmd \
      --httpResponseBodyParse \
      --jsonwrapper 'payload' \
      --msg \
'{  "action": "internalctl",
    "meta": {
                "var":     "/self",
                "set":     {
                     "httpProxy": {
                        "httpSpec": "http://proxy.tch.harvard.edu:3128",
                        "use":  true
                    }
                }
            }
}' --quiet | underscore print --color

# Check on 'moc' settings
pfurl --verb POST --raw \
        --http ${HOST_IP}:5005/api/v1/cmd \
        --httpResponseBodyParse \
        --jsonwrapper 'payload' \
        --msg \
'{  "action": "internalctl",
    "meta": {
                "var":     "/service",
                "get":      "value"
            }
}' --quiet | underscore print --color

# Check on 'self' (proxy) settings
pfurl --verb POST --raw \
        --http ${HOST_IP}:5005/api/v1/cmd \
        --httpResponseBodyParse \
        --jsonwrapper 'payload' \
        --msg \
'{  "action": "internalctl",
    "meta": {
                "var":     "/self",
                "get":      "value"
            }
}' --quiet | underscore print --color

pfurl --verb POST --raw --http ${HOST_IP}:5005/api/v1/cmd   \
        --httpResponseBodyParse --jsonwrapper 'payload' --msg \
'{  "action": "hello",
    "meta": {
                "askAbout":     "sysinfo",
                "echoBack":      "Hi there!",
                "service":       "moc"
            }
}' --quiet | underscore print --color


##############################################################################
# RUN DS plugin (plid:16) `pl-freesurfer_pp_moc` on MOC (pvid:1)  as (jid:2) #
##############################################################################

      ⬤:1        
      |                  
      |           FS(14): pl-mri10yr06mo01da_normal
      ↓
      ⬤:2        DS(16): pl-freesurfer_pp_moc


pfurl --auth chris:chris1234 --verb GET                         \
      --http ${HOST_IP}:${HOST_PORT}/api/v1/plugins/16/         \
      --content-type application/vnd.collection+json            \
      --quiet --jsonpprintindent 4 | underscore print --color


pfurl --auth chris:chris1234 --verb POST                        \
--http ${HOST_IP}:${HOST_PORT}/api/v1/plugins/16/instances/     \
--content-type application/vnd.collection+json                  \
--jsonwrapper 'template' --msg '
{"data":
    [
     {"name":"ageSpec",
      "value":"10-06-01"},
     {"name":"copySpec",
      "value":"stats,sag,cor,tra,3D"},
     {"name":"previous_id",
      "value":"1"}
    ]
}' --quiet | underscore print --color


pfurl --auth chris:chris1234                                      \
      --verb GET                                                  \
      --http ${HOST_IP}:${HOST_PORT}/api/v1/plugins/instances/2/  \
      --content-type application/vnd.collection+json --quiet      \
      --jsonpprintindent 4 | underscore print --color

####################################################################
# RUN DS plugin (plid:15) `pl-mpcs_moc` on MOC (pvid:2) as (jid:3) #
####################################################################
      ⬤:1        
      |                  
      |           FS(14): pl-mri10yr06mo01da_normal
      ↓
      ⬤:2        DS(16): pl-freesurfer_pp_moc
     ╱
    ╱
   ╱
  ╱
 ╱ 
↓  
⬤:3		  DS(15): pl-mpcs_moc

pfurl --auth chris:chris1234 --verb GET                         \
      --http ${HOST_IP}:${HOST_PORT}/api/v1/plugins/15/         \
      --content-type application/vnd.collection+json            \
      --quiet --jsonpprintindent 4 | underscore print --color

pfurl --auth chris:chris1234 --verb POST                        \
--http ${HOST_IP}:${HOST_PORT}/api/v1/plugins/15/instances/.    \
--content-type application/vnd.collection+json 	                \
--jsonwrapper 'template' --msg '
{"data":
    [
     {"name":"random",
      "value":true},
     {"name":"seed",
      "value":"1"},
     {"name":"posRange",
      "value":"3.0"},
     {"name":"negRange",
      "value":"-3.0"},
     {"name":"previous_id",
      "value":"2"}
    ]
}' --quiet | underscore print --color

pfurl --auth chris:chris1234                                            \
      --verb GET                                                        \
      --http ${HOST_IP}:${HOST_PORT}/api/v1/plugins/instances/3/        \
      --content-type application/vnd.collection+json --quiet            \
      --jsonpprintindent 4 | underscore print --color

####################################################################
# RUN DS plugin (plid:15) `pl-mpcs_moc` on MOC (pvid:2) as (jid:4) #
####################################################################
      ⬤:1        
      |                  
      |           FS(14): pl-mri10yr06mo01da_normal
      ↓
      ⬤:2        DS(16): pl-freesurfer_pp_moc
     ╱│
    ╱ │ 
   ╱  │ 
  ╱   │ 
 ╱    │ 
↓     ↓ 
⬤:3  ⬤:4	  DS(15): pl-mpcs_moc

pfurl --auth chris:chris1234 --verb GET                         \
      --http ${HOST_IP}:${HOST_PORT}/api/v1/plugins/15/         \
      --content-type application/vnd.collection+json            \
      --quiet --jsonpprintindent 4 | underscore print --color

pfurl --auth chris:chris1234 --verb POST                        \
--http ${HOST_IP}:${HOST_PORT}/api/v1/plugins/15/instances/.    \
--content-type application/vnd.collection+json                  \
--jsonwrapper 'template' --msg '
{"data":
    [
     {"name":"random",
      "value":true},
     {"name":"seed",
      "value":"1"},
     {"name":"posRange",
      "value":"3.0"},
     {"name":"negRange",
      "value":"-3.0"},
     {"name":"previous_id",
      "value":"2"}
    ]
}' --quiet | underscore print --color

pfurl --auth chris:chris1234                                       \
      --verb GET                                                   \
      --http ${HOST_IP}:${HOST_PORT}/api/v1/plugins/instances/4/   \
      --content-type application/vnd.collection+json --quiet       \
      --jsonpprintindent 4 | underscore print --color

####################################################################
# RUN DS plugin (plid:15) `pl-mpcs_moc` on MOC (pvid:2) as (jid:5) #
####################################################################
      ⬤:1        
      |                  
      |           FS(14): pl-mri10yr06mo01da_normal
      ↓
      ⬤:2        DS(16): pl-freesurfer_pp_moc
     ╱│╲
    ╱ │ ╲
   ╱  │  ╲
  ╱   │   ╲
 ╱    │    ╲
↓     ↓     ↓ 
⬤:3  ⬤:4  ⬤:5  DS(15): pl-mpcs_moc

pfurl --auth chris:chris1234 --verb GET                         \
      --http ${HOST_IP}:${HOST_PORT}/api/v1/plugins/15/         \
      --content-type application/vnd.collection+json            \
      --quiet --jsonpprintindent 4 | underscore print --color

pfurl --auth chris:chris1234 --verb POST                        \
--http ${HOST_IP}:${HOST_PORT}/api/v1/plugins/15/instances/     \
--content-type application/vnd.collection+json                  \
--jsonwrapper 'template' --msg '
{"data":
    [
     {"name":"random",
      "value":true},
     {"name":"seed",
      "value":"1"},
     {"name":"posRange",
      "value":"3.0"},
     {"name":"negRange",
      "value":"-3.0"},
     {"name":"previous_id",
      "value":"2"}
    ]
}' --quiet | underscore print --color

pfurl --auth chris:chris1234                                       \
      --verb GET                                                   \
      --http ${HOST_IP}:${HOST_PORT}/api/v1/plugins/instances/5/   \
      --content-type application/vnd.collection+json --quiet       \
      --jsonpprintindent 4 | underscore print --color

##########################################################################
# RUN DS plugin (plid:17) `pl-z2labelmap_moc` on MOC (pvid:3) as (jid 6) #
##########################################################################
      ⬤:1        
      |                  
      |           FS(14): pl-mri10yr06mo01da_normal
      ↓
      ⬤:2        DS(16): pl-freesurfer_pp_moc
     ╱│╲
    ╱ │ ╲
   ╱  │  ╲
  ╱   │   ╲
 ╱    │    ╲
↓     ↓     ↓ 
⬤:3  ⬤:4  ⬤:5  DS(15): pl-mpcs_moc
│  
↓  
⬤:6		  DS(17): pl-z2labelmap_moc

pfurl --auth chris:chris1234 --verb GET                         \
      --http ${HOST_IP}:${HOST_PORT}/api/v1/plugins/17/         \
      --content-type application/vnd.collection+json            \
      --quiet --jsonpprintindent 4 | underscore print --color

pfurl --auth chris:chris1234 --verb POST                        \
--http ${HOST_IP}:${HOST_PORT}/api/v1/plugins/17/instances/     \
--content-type application/vnd.collection+json                  \
--jsonwrapper 'template' --msg '
{"data":
    [
     {"name":"imageSet",
      "value":"../data/set1"},
     {"name":"negColor",
      "value":"B"},
     {"name":"posColor",
      "value":"R"},
     {"name":"previous_id",
      "value":"3"}
    ]
}' \
--quiet | underscore print --color

pfurl --auth chris:chris1234                                       \
      --verb GET                                                   \
      --http ${HOST_IP}:${HOST_PORT}/api/v1/plugins/instances/6/   \
      --content-type application/vnd.collection+json --quiet       \
      --jsonpprintindent 4 | underscore print --color

##########################################################################
# RUN DS plugin (plid:17) `pl-z2labelmap_moc` on MOC (pvid:4) as (jid 7) #
##########################################################################
      ⬤:1        
      |                  
      |           FS(14): pl-mri10yr06mo01da_normal
      ↓
      ⬤:2        DS(16): pl-freesurfer_pp_moc
     ╱│╲
    ╱ │ ╲
   ╱  │  ╲
  ╱   │   ╲
 ╱    │    ╲
↓     ↓     ↓ 
⬤:3  ⬤:4  ⬤:5  DS(15): pl-mpcs_moc
│     │  
↓     ↓  
⬤:6  ⬤:7 	  DS(17): pl-z2labelmap_moc

pfurl --auth chris:chris1234 --verb GET                         \
      --http ${HOST_IP}:${HOST_PORT}/api/v1/plugins/17/         \
      --content-type application/vnd.collection+json            \
      --quiet --jsonpprintindent 4 | underscore print --color

pfurl --auth chris:chris1234 --verb POST                        \
--http ${HOST_IP}:${HOST_PORT}/api/v1/plugins/17/instances/     \
--content-type application/vnd.collection+json                  \
--jsonwrapper 'template' --msg '
{"data":
    [
     {"name":"imageSet",
      "value":"../data/set1"},
     {"name":"negColor",
      "value":"B"},
     {"name":"posColor",
      "value":"R"},
     {"name":"previous_id",
      "value":"4"}
    ]
}' \
--quiet | underscore print --color

pfurl --auth chris:chris1234                                       \
      --verb GET                                                   \
      --http ${HOST_IP}:${HOST_PORT}/api/v1/plugins/instances/7/   \
      --content-type application/vnd.collection+json --quiet       \
      --jsonpprintindent 4 | underscore print --color

##########################################################################
# RUN DS plugin (plid:17) `pl-z2labelmap_moc` on MOC (pvid:5) as (jid 8) #
##########################################################################
      ⬤:1        
      |                  
      |           FS(14): pl-mri10yr06mo01da_normal
      ↓
      ⬤:2        DS(16): pl-freesurfer_pp_moc
     ╱│╲
    ╱ │ ╲
   ╱  │  ╲
  ╱   │   ╲
 ╱    │    ╲
↓     ↓     ↓ 
⬤:3  ⬤:4  ⬤:5  DS(15): pl-mpcs_moc
│     │     │   
↓     ↓     ↓
⬤:6  ⬤:7  ⬤:8  DS(17): pl-z2labelmap_moc

pfurl --auth chris:chris1234 --verb GET                         \
      --http ${HOST_IP}:${HOST_PORT}/api/v1/plugins/17/         \
      --content-type application/vnd.collection+json            \
      --quiet --jsonpprintindent 4 | underscore print --color

pfurl --auth chris:chris1234 --verb POST                        \
--http ${HOST_IP}:${HOST_PORT}/api/v1/plugins/17/instances/     \
--content-type application/vnd.collection+json                  \
--jsonwrapper 'template' --msg '
{"data":
    [
     {"name":"imageSet",
      "value":"../data/set1"},
     {"name":"negColor",
      "value":"B"},
     {"name":"posColor",
      "value":"R"},
     {"name":"previous_id",
      "value":"5"}
    ]
}' \
--quiet | underscore print --color

pfurl --auth chris:chris1234                                       \
      --verb GET                                                   \
      --http ${HOST_IP}:${HOST_PORT}/api/v1/plugins/instances/8/   \
      --content-type application/vnd.collection+json --quiet       \
      --jsonpprintindent 4 | underscore print --color

The set of operations are:

  • instantiate CUBE;
    • if using pl-mri10yr06mo01da_normal then simply run the plugin;
    • if using pl-pacscopy then after instantiation:
      • clear the internal pman job-ID jid database;
      • pull a sample dataset from github;
      • push into openstorage
      • the the pl-pacscopy plugin
  • run the FS data through pl-freesurfer_pp to create a FreeSurfer output (pre calculated on the FS output)
  • run the FreeSurfer output through three parallel pl-mpcs plugins, each generating a different output
  • run each of the 3 outputs through a pl-z2labelmap to create one of three sets of heat maps.

Instantiate CUBE

Make sure you are in the base directory of the ChRIS_ultron_backEnd (CUBE) repo:

git clone https://github.com/FNNDSC/ChRIS_ultron_backEnd
cd ChRIS_ultron_backEnd

*destroy* ; sudo rm -fr CHRIS_REMOTE_FS; rm -fr CHRIS_REMOTE_FS ; *make* -U -I -s

Set some convenience environment variables

export HOST_IP=$(ip route | grep -v docker | awk '{if(NF==11) print $9}')
export HOST_PORT=8000

Create the Feed

pfurl --auth chris:chris1234 --verb POST                          \
      --http ${HOST_IP}:${HOST_PORT}/api/v1/plugins/18/instances/ \
      --content-type application/vnd.collection+json              \
      --jsonwrapper 'template' --msg '
{"data":
    [{"name":"dir",
      "value":"/usr/src/data"}
    ]
}' \
--quiet --jsonpprintindent 4

Query and register output files

Query the status of the plugin job:

pfurl --auth chris:chris1234                               \
      --verb GET                                           \
      --http ${HOST_IP}:${HOST_PORT}/api/v1/plugins/instances/1/   \
      --content-type application/vnd.collection+json       \
      --quiet --jsonpprintindent 4

Run the DICOMs pulled in the FS instance to pl-freesurfer_pp

CLI equivalent

mkdir in out && chmod 777 out
docker run --rm -v $(pwd)/in:/incoming -v $(pwd)/out:/outgoing      \
        fnndsc/pl-freesurfer_pp freesurfer_pp.py                    \
        -a 10-06-01                                                 \
        -c stats,sag,cor,tra,3D                                     \
        /incoming /outgoing

In the context of CUBE,

pfurl --auth chris:chris1234 --verb POST \
--http ${HOST_IP}:${HOST_PORT}/api/v1/plugins/12/instances/ \
--content-type application/vnd.collection+json \
--jsonwrapper 'template' --msg '
{"data":
    [
     {"name":"ageSpec",
      "value":"10-06-01"},
     {"name":"copySpec",
      "value":"stats,sag,cor,tra,3D"},
     {"name":"previous_id",
      "value":"1"}
    ]
}' \
--quiet --jsonpprintindent 4

NOTE: Please be patient with this plugin. Due to the high volume of data, it can take several minutes to complete.

Query the results of the plugin call:

pfurl --auth chris:chris1234                               \
      --verb GET                                           \
      --http ${HOST_IP}:${HOST_PORT}/api/v1/plugins/instances/2/   \
      --content-type application/vnd.collection+json       \
      --quiet --jsonpprintindent 4

The various MPC plugins feeding off the pl-freesurfer_pp output

The equivalent CLI call for the plugin would be

mkdir in out && chmod 777 out
docker run --rm -v $(pwd)/in:/incoming -v $(pwd)/out:/outgoing      \
        fnndsc/pl-mpcs mpcs.py                                      \
        --random --seed 1                                           \
        --posRange 3.0 --negRange -3.0                              \
        in out

which in the context of CUBE becomes

pfurl --auth chris:chris1234 --verb POST \
--http ${HOST_IP}:${HOST_PORT}/api/v1/plugins/11/instances/ \
--content-type application/vnd.collection+json \
--jsonwrapper 'template' --msg '
{"data":
    [
     {"name":"random",
      "value":true},
     {"name":"seed",
      "value":"1"},
     {"name":"posRange",
      "value":"3.0"},
     {"name":"negRange",
      "value":"-3.0"},
     {"name":"previous_id",
      "value":"2"}
    ]
}' \
--quiet --jsonpprintindent 4

and query the status of the call with

pfurl --auth chris:chris1234                               \
      --verb GET                                           \
      --http ${HOST_IP}:${HOST_PORT}/api/v1/plugins/instances/3/   \
      --content-type application/vnd.collection+json       \
      --quiet --jsonpprintindent 4

This call can take some time to complete, mostly due to data transfers.

Repeat the plugin call two more times. Test the status of each with

Instance 4

pfurl --auth chris:chris1234 --verb POST \
--http ${HOST_IP}:${HOST_PORT}/api/v1/plugins/11/instances/ \
--content-type application/vnd.collection+json \
--jsonwrapper 'template' --msg '
{"data":
    [
     {"name":"random",
      "value":true},
     {"name":"seed",
      "value":"1"},
     {"name":"posRange",
      "value":"3.0"},
     {"name":"negRange",
      "value":"-3.0"},
     {"name":"previous_id",
      "value":"2"}
    ]
}' \
--quiet --jsonpprintindent 4
pfurl --auth chris:chris1234                               \
      --verb GET                                           \
      --http ${HOST_IP}:${HOST_PORT}/api/v1/plugins/instances/4/   \
      --content-type application/vnd.collection+json       \
      --quiet --jsonpprintindent 4

Instance 5

pfurl --auth chris:chris1234 --verb POST \
--http ${HOST_IP}:${HOST_PORT}/api/v1/plugins/11/instances/ \
--content-type application/vnd.collection+json \
--jsonwrapper 'template' --msg '
{"data":
    [
     {"name":"random",
      "value":true},
     {"name":"seed",
      "value":"1"},
     {"name":"posRange",
      "value":"3.0"},
     {"name":"negRange",
      "value":"-3.0"},
     {"name":"previous_id",
      "value":"2"}
    ]
}' \
--quiet --jsonpprintindent 4
pfurl --auth chris:chris1234                               \
      --verb GET                                           \
      --http ${HOST_IP}:${HOST_PORT}/api/v1/plugins/instances/5/   \
      --content-type application/vnd.collection+json       \
      --quiet --jsonpprintindent 4

Run the pl-z2labelmap on each parallel branch

Now, finally, we will run the pl-z2labelmap on each branch of the pl-mpc output. The equivalent CLI call is

docker run --rm -v $(pwd)/in:/incoming -v $(pwd)/out:/outgoing  \
        fnndsc/pl-z2labelmap z2labelmap.py                      \
        --scaleRange 2.0 --lowerFilter 0.8                      \
        --negColor B --posColor R                               \
        /incoming /outgoing

Which, in each branch becomes:

Branch ID:6 pl-z2labelmap: connect to ID:3 pl-mpcs 

pfurl --auth chris:chris1234 --verb POST \
--http ${HOST_IP}:${HOST_PORT}/api/v1/plugins/13/instances/ \
--content-type application/vnd.collection+json \
--jsonwrapper 'template' --msg '
{"data":
    [
     {"name":"imageSet",
      "value":"../data/set1"},
     {"name":"negColor",
      "value":"B"},
     {"name":"posColor",
      "value":"R"},
     {"name":"previous_id",
      "value":"3"}
    ]
}' \
--quiet --jsonpprintindent 4
pfurl --auth chris:chris1234                               \
      --verb GET                                           \
      --http ${HOST_IP}:${HOST_PORT}/api/v1/plugins/instances/6/   \
      --content-type application/vnd.collection+json       \
      --quiet --jsonpprintindent 4

Branch ID:7 pl-z2labelmap: connect to ID:4 pl-mpcs 

pfurl --auth chris:chris1234 --verb POST \
--http ${HOST_IP}:${HOST_PORT}/api/v1/plugins/13/instances/ \
--content-type application/vnd.collection+json \
--jsonwrapper 'template' --msg '
{"data":
    [
     {"name":"imageSet",
      "value":"../data/set1"},
     {"name":"negColor",
      "value":"B"},
     {"name":"posColor",
      "value":"R"},
     {"name":"previous_id",
      "value":"4"}
    ]
}' \
--quiet --jsonpprintindent 4
pfurl --auth chris:chris1234                               \
      --verb GET                                           \
      --http ${HOST_IP}:${HOST_PORT}/api/v1/plugins/instances/7/   \
      --content-type application/vnd.collection+json       \
      --quiet --jsonpprintindent 4

Branch ID:8 pl-z2labelmap: connect to ID:5 pl-mpcs 

pfurl --auth chris:chris1234 --verb POST \
--http ${HOST_IP}:${HOST_PORT}/api/v1/plugins/13/instances/ \
--content-type application/vnd.collection+json \
--jsonwrapper 'template' --msg '
{"data":
    [
     {"name":"imageSet",
      "value":"../data/set1"},
     {"name":"negColor",
      "value":"B"},
     {"name":"posColor",
      "value":"R"},
     {"name":"previous_id",
      "value":"5"}
    ]
}' \
--quiet --jsonpprintindent 4
pfurl --auth chris:chris1234                               \
      --verb GET                                           \
      --http ${HOST_IP}:${HOST_PORT}/api/v1/plugins/instances/8/   \
      --content-type application/vnd.collection+json       \
      --quiet --jsonpprintindent 4

-30-

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