monolithic beast no more
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Added entirely new documentation website, built using Material for Mkdocs. Thanks to @ewels for a fantastic (late-night) effort to break up and restructure what had become a fairly unwieldy monolithic beast of markdown document...
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Added docs for cytosine context summary, useful for
GpC
methylation or filtering for specific C context (e.g.CpA
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Updated docs for the dovetailing
Bismark
- Warning messages for closing ambiguous and unmapped file handles only occur when these options were specified see here